RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TOP1MTQ969P6 601 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 PABPC5Q96DU9 382 aaKnown RBP18.91■□□□□ 0.62
HOXA9-201ENST00000343483 TMEM169Q96HH4 297 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 FICDQ9BVA6 458 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 FSD1LQ9BXM9 530 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 DNMT3LQ9UJW3 386 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 MICAL3Q7RTP6 2002 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 J3KR12 359 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 ATP5HO75947 161 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 SOD2P04179 222 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 KRT16P08779 473 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 BGNP21810 368 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 ATP5C1P36542 298 aaKnown RBP18.91■□□□□ 0.62
HOXA9-201ENST00000343483 SERPINB4P48594 390 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 GEMP55040 296 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 DEFB103AP81534 67 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 NADSYN1Q6IA69 706 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 KDELC2Q7Z4H8 507 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 ZNF558Q96NG5 402 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 CDK5RAP1Q96SZ6 601 aaKnown RBP18.91■□□□□ 0.62
HOXA9-201ENST00000343483 SP110Q9HB58 689 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 CYP4F11Q9HBI6 524 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 NOD2Q9HC29 1040 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 AFF4Q9UHB7 1163 aaKnown RBP18.91■□□□□ 0.62
HOXA9-201ENST00000343483 DCTN4Q9UJW0 460 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 PLLPQ9Y342 182 aa18.91■□□□□ 0.62
HOXA9-201ENST00000343483 ITGA2BP08514 1039 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 TIFABQ6ZNK6 161 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 KLHDC8BQ8IXV7 354 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 RFWD2Q8NHY2 731 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 ZNF461Q8TAF7 563 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 PSMG2Q969U7 264 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 MYEOVQ96EZ4 313 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 PPP1R2P1Q96PQ5 205 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 KLHL5Q96PQ7 755 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 AGAP2Q99490 1192 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 TRIM55Q9BYV6 548 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 C20orf96Q9NUD7 363 aaPredicted RBP18.9■□□□□ 0.62
HOXA9-201ENST00000343483 SOX13Q9UN79 622 aa18.9■□□□□ 0.62
HOXA9-201ENST00000343483 TPP1O14773 563 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 RAMP2O60895 175 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 PEX11BO96011 259 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 ALDOAP04075 364 aaKnown RBP18.89■□□□□ 0.62
HOXA9-201ENST00000343483 TARSP26639 723 aaKnown RBP18.89■□□□□ 0.62
HOXA9-201ENST00000343483 OR1E1P30953 314 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 RFC2P35250 354 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 GP5P40197 560 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 NUMBP49757 651 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 RENBPP51606 427 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 PDE1BQ01064 536 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 ITKQ08881 620 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 RIPK1Q13546 671 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 HSP90AA5PQ58FG0 334 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 ZNF449Q6P9G9 518 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 ARMC2Q8NEN0 867 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 PDZD8Q8NEN9 1154 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 CPNE1Q99829 537 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 NT5MQ9NPB1 228 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 MKS1Q9NXB0 559 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 STK38LQ9Y2H1 464 aa18.89■□□□□ 0.62
HOXA9-201ENST00000343483 HBS1LQ9Y450 684 aaKnown RBP18.89■□□□□ 0.62
HOXA9-201ENST00000343483 ABHD14A-ACY1A0A1B0GW23 586 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 ZNF840PA6NDX5 716 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 DRGXA6NNA5 263 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 TOP3BO95985 862 aaKnown RBP18.89■□□□□ 0.61
HOXA9-201ENST00000343483 F7P08709 466 aaPredicted RBP18.89■□□□□ 0.61
HOXA9-201ENST00000343483 CSF2RAP15509 400 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 TACR2P21452 398 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 NMBRP28336 390 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 HNRNPDQ14103 355 aaKnown RBP18.89■□□□□ 0.61
HOXA9-201ENST00000343483 BTG3Q14201 252 aaPredicted RBP18.89■□□□□ 0.61
HOXA9-201ENST00000343483 POU6F1Q14863 301 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 POLD3Q15054 466 aaPredicted RBP18.89■□□□□ 0.61
HOXA9-201ENST00000343483 TAF12Q16514 161 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 PCSK7Q16549 785 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 ACBD5Q5T8D3 534 aaPredicted RBP18.89■□□□□ 0.61
HOXA9-201ENST00000343483 MARC1Q5VT66 337 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 STRA8Q7Z7C7 330 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 KCNMB4Q86W47 210 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 C7orf61Q8IZ16 206 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 LGI2Q8N0V4 545 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 SLC39A11Q8N1S5 342 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 MAGEC3Q8TD91 643 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 ATXN7L3BQ96GX2 97 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 CEP295NLQ96MC4 621 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 ZNF778Q96MU6 729 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 ATXN3LQ9H3M9 355 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 ZFP69BQ9UJL9 534 aa18.89■□□□□ 0.61
HOXA9-201ENST00000343483 NYNRINQ9P2P1 1898 aaKnown RBP18.89■□□□□ 0.61
HOXA9-201ENST00000343483 F5H5T6 163 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 GJB5O95377 273 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 SYN1P17600 705 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 ITGB8P26012 769 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 CRHR1P34998 444 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 ALDH1A3P47895 512 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 MAXP61244 160 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 DSG1Q02413 1049 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 SLC10A7Q0GE19 358 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 HECTD3Q5T447 861 aa18.88■□□□□ 0.61
HOXA9-201ENST00000343483 RFWD3Q6PCD5 774 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms