RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TCP10LQ8TDR4 215 aa13.3□□□□□ -0.28
COL18A1-201ENST00000342220 SERPINB11Q96P15 392 aa13.3□□□□□ -0.28
COL18A1-201ENST00000342220 SLC2A13Q96QE2 648 aa13.3□□□□□ -0.28
COL18A1-201ENST00000342220 TCF25Q9BQ70 676 aa13.3□□□□□ -0.28
COL18A1-201ENST00000342220 SLC17A7Q9P2U7 560 aa13.3□□□□□ -0.28
COL18A1-201ENST00000342220 LNPEPQ9UIQ6 1025 aa13.3□□□□□ -0.28
COL18A1-201ENST00000342220 CBX4O00257 560 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 UGT1A9O60656 530 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 TIMP1P01033 207 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 GM2AP17900 193 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 KBTBD12Q3ZCT8 623 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 LINGO4Q6UY18 593 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 MTDHQ86UE4 582 aaKnown RBP13.29□□□□□ -0.28
COL18A1-201ENST00000342220 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.281e-14■■■■■ 60.5
COL18A1-201ENST00000342220 NAT8LQ8N9F0 302 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 ATP11CQ8NB49 1132 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 PHC3Q8NDX5 983 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 SPPL2BQ8TCT7 592 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 VN1R3Q9BXE9 311 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 FSD1LQ9BXM9 530 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 IGFLR1Q9H665 355 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 UGT1A7Q9HAW7 530 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 UGT1A10Q9HAW8 530 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 UGT1A8Q9HAW9 530 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 CYLDQ9NQC7 956 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 BRWD1Q9NSI6 2320 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 GOLGA4Q13439 2230 aaKnown RBP13.29□□□□□ -0.28
COL18A1-201ENST00000342220 ATP5C1P36542 298 aaKnown RBP13.29□□□□□ -0.28
COL18A1-201ENST00000342220 HARS2P49590 506 aaKnown RBP13.29□□□□□ -0.28
COL18A1-201ENST00000342220 TRMT10BQ6PF06 316 aaKnown RBP13.29□□□□□ -0.28
COL18A1-201ENST00000342220 RINLQ6ZS11 566 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 RYBPQ8N488 228 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-201ENST00000342220 OR6K2Q8NGY2 324 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 RFWD2Q8NHY2 731 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 ING5Q8WYH8 240 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 SLC39A8Q9C0K1 460 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 ZFP69BQ9UJL9 534 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 F5P12259 2224 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 A0A1W2PRU2 124 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 H0Y3Z8 333 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 PEX11AO75192 247 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 ZWINTO95229 277 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 LRG1P02750 347 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 SERPINB6P35237 376 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 GMPRP36959 345 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 ZBTB17Q13105 803 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 STXBP5Q5T5C0 1151 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 DNAJB7Q7Z6W7 309 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-201ENST00000342220 CENPIQ92674 756 aaPredicted RBP13.29□□□□□ -0.28
COL18A1-201ENST00000342220 SLC22A12Q96S37 553 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 CSNK1G1Q9HCP0 422 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 ATXN10Q9UBB4 475 aa13.29□□□□□ -0.28
COL18A1-201ENST00000342220 J3KR12 359 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 SMAPO00193 183 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 GJB3O75712 270 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 WFS1O76024 890 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 HDCP19113 662 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 PHBP35232 272 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 CHRNA4P43681 627 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 SERPINB4P48594 390 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 SMAD3P84022 425 aaKnown RBP13.28□□□□□ -0.28
COL18A1-201ENST00000342220 LBRQ14739 615 aaKnown RBP13.28□□□□□ -0.28
COL18A1-201ENST00000342220 CERCAMQ5T4B2 595 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 SLC9A4Q6AI14 798 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 ADGRD1Q6QNK2 874 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 LIMS2Q7Z4I7 341 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 PCGF5Q86SE9 256 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 PRPF39Q86UA1 669 aaKnown RBP13.28□□□□□ -0.28
COL18A1-201ENST00000342220 RNF168Q8IYW5 571 aaPredicted RBP13.28□□□□□ -0.28
COL18A1-201ENST00000342220 CARNMT1Q8N4J0 409 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 OR7D4Q8NG98 312 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 MCOLN1Q9GZU1 580 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 IPO11Q9UI26 975 aaKnown RBP13.28□□□□□ -0.28
COL18A1-201ENST00000342220 TSR3Q9UJK0 312 aaKnown RBP13.28□□□□□ -0.28
COL18A1-201ENST00000342220 YIPF1Q9Y548 306 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 CCDC85CA6NKD9 419 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 A8MX80 341 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 TNFRSF10BO14763 440 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 FGFR3P22607 806 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 CXCR3P49682 368 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 RASA2Q15283 850 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 RAB41Q5JT25 222 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 FBXL22Q6P050 247 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 LCA5Q86VQ0 697 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 HS6ST3Q8IZP7 471 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 ZNF276Q8N554 614 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 MZB1Q8WU39 189 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 DCAKDQ8WVC6 231 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 UCMAQ8WVF2 138 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 INPP5DQ92835 1189 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 PTPRN2Q92932 1015 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 IGSF8Q969P0 613 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 ZNF669Q96BR6 464 aaPredicted RBP13.28□□□□□ -0.28
COL18A1-201ENST00000342220 MUC3BQ9H195 1237 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 ACSS3Q9H6R3 686 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 HCFC1R1Q9NWW0 138 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
COL18A1-201ENST00000342220 CNPP09543 421 aaKnown RBP13.28□□□□□ -0.28
COL18A1-201ENST00000342220 ACVRL1P37023 503 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms