RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 HDAC8Q9BY41 377 aa13.35□□□□□ -0.27
NECTIN1-203ENST00000341398 CLCA2Q9UQC9 943 aa13.35□□□□□ -0.27
NECTIN1-203ENST00000341398 HS3ST3A1Q9Y663 406 aa13.35□□□□□ -0.27
NECTIN1-203ENST00000341398 IGLV3-10A0A075B6K4 115 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 SIGLEC6O43699 453 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 SDC3O75056 442 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 CTSLP07711 333 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 GLDCP23378 1020 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 DGKAP23743 735 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 ETFBP38117 255 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 DNA2P51530 1060 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 ARL13BQ3SXY8 428 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 C22orf39Q6P5X5 142 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 KANSL1Q7Z3B3 1105 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 TFAP2DQ7Z6R9 452 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 ZSCAN30Q86W11 494 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 PCDH20Q8N6Y1 951 aaKnown RBP13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 TMEM145Q8NBT3 493 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 HEPHQ9BQS7 1158 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 CALN1Q9BXU9 219 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 ZYG11BQ9C0D3 744 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 RETREG1Q9H6L5 497 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 MPP6Q9NZW5 540 aa13.34□□□□□ -0.27
NECTIN1-203ENST00000341398 A0A0D9SEW6 157 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 K7ERQ8 282 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 SMAD6O43541 496 aaKnown RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 LEFTY1O75610 366 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 PNMA6AP0CW24 399 aaPredicted RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 PRLRP16471 622 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 ACTN2P35609 894 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 DUSP3P51452 185 aaPredicted RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 NEK3P51956 506 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 GEMIN4P57678 1058 aaKnown RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 HNRNPKP61978 463 aaKnown RBP eCLIP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 RPS21P63220 83 aaKnown RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 ZNF284Q2VY69 593 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 PROX2Q3B8N5 592 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 KLHDC7AQ5VTJ3 777 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 KIAA1161Q6NSJ0 714 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 LINGO4Q6UY18 593 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 ARCQ7LC44 396 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 XYLT1Q86Y38 959 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 ZNF683Q8IZ20 524 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 SLC25A45Q8N413 288 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 OR4C6Q8NH72 309 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 GRIN3AQ8TCU5 1115 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 RFFLQ8WZ73 363 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 FGF11Q92914 225 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 ARRDC3Q96B67 414 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 MYOCQ99972 504 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 DUSP23Q9BVJ7 150 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 SLC17A9Q9BYT1 436 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 TNKS2Q9H2K2 1166 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 ATP13A1Q9HD20 1204 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 PPARGC1AQ9UBK2 798 aaKnown RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 IPO11Q9UI26 975 aaKnown RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 AJAP1Q9UKB5 411 aaPredicted RBP13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 HPCAL4Q9UM19 191 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 CA5BQ9Y2D0 317 aa13.33□□□□□ -0.27
NECTIN1-203ENST00000341398 IGSF10Q6WRI0 2623 aa13.33□□□□□ -0.28
NECTIN1-203ENST00000341398 HELZ2Q9BYK8 2649 aaKnown RBP13.33□□□□□ -0.28
NECTIN1-203ENST00000341398 CXorf51AA0A1B0GTR3 108 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 A6NNZ2 444 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 GOLGA8SH3BPF8 625 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 ENDOD1O94919 500 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 TPM2P07951 284 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 TFE3P19532 575 aaPredicted RBP13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 L1CAMP32004 1257 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 EIF2S3P41091 472 aaKnown RBP13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 CLDN6P56747 220 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 SGCGQ13326 291 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 CARD16Q5EG05 197 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 CT47A1Q5JQC4 288 aaPredicted RBP13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 OTUD1Q5VV17 481 aaPredicted RBP13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 TAF3Q5VWG9 929 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 DPY19L3Q6ZPD9 716 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 Q6ZSR6 202 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 ZNF677Q86XU0 584 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 CHST14Q8NCH0 376 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 OR7D4Q8NG98 312 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 UBL7Q96S82 380 aaPredicted RBP13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 STK33Q9BYT3 514 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 ABCG4Q9H172 646 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 USP29Q9HBJ7 922 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 ANLNQ9NQW6 1124 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 SNX10Q9Y5X0 201 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 MAST4O15021 2626 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 H3BM21 787 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 TRIM38O00635 465 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 RIOK3O14730 519 aaKnown RBP13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 FFAR2O15552 330 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 PIAS2O75928 621 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 MT-CO3P00414 261 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 ADRB3P13945 408 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 UCHL3P15374 230 aa13.32□□□□□ -0.28
NECTIN1-203ENST00000341398 ITGB7P26010 798 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms