RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 KMT5AQ9NQR1 393 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 SH3GLB2Q9NR46 395 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 ASF1BQ9NVP2 202 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 PCDHA12Q9UN75 941 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 DERAQ9Y315 318 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 NEU2Q9Y3R4 380 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 PCDHGA3Q9Y5H0 932 aa11.55□□□□□ -0.56
ATXN3-201ENST00000340660 MRPS18BQ9Y676 258 aaKnown RBP11.55□□□□□ -0.56
ATXN3-201ENST00000340660 A0A0B4J269 797 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 SLC16A4O15374 487 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 HUS1O60921 280 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 RNASEH1O60930 286 aaKnown RBP11.54□□□□□ -0.56
ATXN3-201ENST00000340660 BAG4O95429 457 aaKnown RBP11.54□□□□□ -0.56
ATXN3-201ENST00000340660 KLKB1P03952 638 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 PRLRP16471 622 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 DRD3P35462 400 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 METAP1P53582 386 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 MC1RQ01726 317 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 SETDB1Q15047 1291 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 ZPBP2Q6X784 338 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 CHST9Q7L1S5 443 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 SLITRK4Q8IW52 837 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 CD302Q8IX05 232 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 NUP93Q8N1F7 819 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 HAPLN3Q96S86 360 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 SLC2A11Q9BYW1 496 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 SRA1Q9HD15 236 aaKnown RBP11.54□□□□□ -0.56
ATXN3-201ENST00000340660 SLAMF7Q9NQ25 335 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 B3GALT1Q9Y5Z6 326 aa11.54□□□□□ -0.56
ATXN3-201ENST00000340660 SLC31A1O15431 190 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 RNGTTO60942 597 aaKnown RBP11.53□□□□□ -0.56
ATXN3-201ENST00000340660 GCATO75600 419 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 DLDP09622 509 aaKnown RBP11.53□□□□□ -0.56
ATXN3-201ENST00000340660 FGF3P11487 239 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-201ENST00000340660 PDCP20941 246 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 LHX1P48742 406 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 CLDN2P57739 230 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 PPP2R2AP63151 447 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 PDE4CQ08493 712 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 C9orf64Q5T6V5 341 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 OR6B2Q6IFH4 312 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 LINGO4Q6UY18 593 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-201ENST00000340660 GCNT7Q6ZNI0 430 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 TMEM135Q86UB9 458 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 FAM131CQ96AQ9 280 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 KIAA1143Q96AT1 154 aaPredicted RBP11.53□□□□□ -0.56
ATXN3-201ENST00000340660 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 TAAR9Q96RI9 348 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 TRIM55Q9BYV6 548 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 GPR27Q9NS67 375 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 CPSF3Q9UKF6 684 aaKnown RBP11.53□□□□□ -0.56
ATXN3-201ENST00000340660 PILRAQ9UKJ1 303 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 C2CD2Q9Y426 696 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 RNF215Q9Y6U7 377 aa11.53□□□□□ -0.56
ATXN3-201ENST00000340660 MDM4O15151 490 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 PLRG1O43660 514 aaKnown RBP11.52□□□□□ -0.57
ATXN3-201ENST00000340660 F9P00740 461 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 FOSL1P15407 271 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 RECQLP46063 649 aaPredicted RBP11.52□□□□□ -0.57
ATXN3-201ENST00000340660 PGDP52209 483 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 RCAN1P53805 252 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 ATP11AP98196 1134 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 GOLGA8FQ08AF8 430 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 GOLGA8DPQ0D2H9 430 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 STRN3Q13033 797 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 NTRK3Q16288 839 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 HNRNPA1L2Q32P51 320 aaKnown RBP11.52□□□□□ -0.57
ATXN3-201ENST00000340660 ARTNQ5T4W7 220 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 PHF19Q5T6S3 580 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 ABI3BPQ7Z7G0 1075 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 NXPE1Q8N323 547 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 KLK6Q92876 244 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 FAM129BQ96TA1 746 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 SLC26A6Q9BXS9 759 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 LNPKQ9C0E8 428 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 CXXC4Q9H2H0 198 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 TUFT1Q9NNX1 390 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 MEGF8Q7Z7M0 2845 aa11.52□□□□□ -0.57
ATXN3-201ENST00000340660 OGTO15294 1046 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 STC2O76061 302 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 RTN3O95197 1032 aaPredicted RBP11.51□□□□□ -0.57
ATXN3-201ENST00000340660 VAV1P15498 845 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 C5AR1P21730 350 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 HTR1EP28566 365 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 ITGA1P56199 1179 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 AKAP17AQ02040 695 aaKnown RBP11.51□□□□□ -0.57
ATXN3-201ENST00000340660 HYAL2Q12891 473 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 KYAT1Q16773 422 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 ZNF630Q2M218 657 aaPredicted RBP11.51□□□□□ -0.57
ATXN3-201ENST00000340660 SOWAHAQ2M3V2 549 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 MBLAC2Q68D91 279 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 SLC6A19Q695T7 634 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 Q6ZSR6 202 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 KIAA0907Q7Z7F0 614 aaPredicted RBP11.51□□□□□ -0.57
ATXN3-201ENST00000340660 PHC2Q8IXK0 858 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 KYQ8NBH2 561 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 WFIKKN2Q8TEU8 576 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 KBTBD7Q8WVZ9 684 aa11.51□□□□□ -0.57
ATXN3-201ENST00000340660 HVCN1Q96D96 273 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms