RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 GSTA1P08263 222 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 POU3F3P20264 500 aaPredicted RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 SERPINB4P48594 390 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 TAF10Q12962 218 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 DUSP4Q13115 394 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 C10orf120Q5SQS8 335 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 RNF43Q68DV7 783 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 KIAA1841Q6NSI8 718 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 PACS1Q6VY07 963 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 RNF19BQ6ZMZ0 732 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 CDHR3Q6ZTQ4 885 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 OTOAQ7RTW8 1153 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 TMC7Q7Z402 723 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 C14orf80Q86SX3 495 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 LRRC49Q8IUZ0 686 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 ZNF276Q8N554 614 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 THOC1Q96FV9 657 aaKnown RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 SPATA17Q96L03 361 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 RMDN2Q96LZ7 410 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 TCF25Q9BQ70 676 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.28□□□□□ -0.6
LRP1-202ENST00000338962 MRPL17Q9NRX2 175 aaKnown RBP11.28□□□□□ -0.6
LRP1-202ENST00000338962 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
LRP1-202ENST00000338962 IL1RAPL1Q9NZN1 696 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 LMCD1Q9NZU5 365 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 FNIP2Q9P278 1114 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 SLC17A6Q9P2U8 582 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 MTRRQ9UBK8 725 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 PLLPQ9Y342 182 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 PLXNA3P51805 1871 aa11.28□□□□□ -0.6
LRP1-202ENST00000338962 CCDC189A1A4V9 331 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 ANXA9O76027 345 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 USP1O94782 785 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 CXCL14O95715 111 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 TBX18O95935 607 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 URODP06132 367 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 TROVE2P10155 538 aaKnown RBP eCLIP11.27□□□□□ -0.6
LRP1-202ENST00000338962 ERVK-10P10266 1014 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 ALDH3A1P30838 453 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 CRHR1P34998 444 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 NPY2RP49146 381 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 RPL10AP62906 217 aaKnown RBP11.27□□□□□ -0.6
LRP1-202ENST00000338962 GRIN2CQ14957 1233 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 SMAD1Q15797 465 aaKnown RBP11.27□□□□□ -0.6
LRP1-202ENST00000338962 PSMD5Q16401 504 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 SLC8B1Q6J4K2 584 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 RSPO2Q6UXX9 243 aaPredicted RBP11.27□□□□□ -0.6
LRP1-202ENST00000338962 TIFABQ6ZNK6 161 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 OTOP3Q7RTS5 596 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 TMEM135Q86UB9 458 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 ATP6V0D2Q8N8Y2 350 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 C2orf15Q8WU43 125 aaKnown RBP11.27□□□□□ -0.6
LRP1-202ENST00000338962 ATP2A3Q93084 1043 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 BTN2A3PQ96KV6 586 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 PPP1R2P1Q96PQ5 205 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 ZYG11BQ9C0D3 744 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 CRISPLD1Q9H336 500 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 HAUS2Q9NVX0 235 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 MARCH2Q9P0N8 246 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 MAGED2Q9UNF1 606 aaPredicted RBP11.27□□□□□ -0.6
LRP1-202ENST00000338962 SLC12A4Q9UP95 1085 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 CDH23Q9H251 3354 aa11.27□□□□□ -0.6
LRP1-202ENST00000338962 FAM237BA0A1B0GVD1 139 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 RFXAPO00287 272 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 HGSO14964 777 aaPredicted RBP11.27□□□□□ -0.61
LRP1-202ENST00000338962 UBOX5O94941 541 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 C1RP00736 705 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 ITGA2BP08514 1039 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 IRS1P35568 1242 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 GP5P40197 560 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 PDE1BQ01064 536 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 CREMQ03060 361 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 TRIP4Q15650 581 aaPredicted RBP11.27□□□□□ -0.61
LRP1-202ENST00000338962 ANO4Q32M45 955 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 MS4A13Q5J8X5 152 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 CERCAMQ5T4B2 595 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 TFAP2DQ7Z6R9 452 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 FITM2Q8N6M3 262 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 ARMC2Q8NEN0 867 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 SPATA22Q8NHS9 363 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 ACMSDQ8TDX5 336 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 GDPD5Q8WTR4 605 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 PTPRN2Q92932 1015 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 MRPL38Q96DV4 380 aaKnown RBP11.27□□□□□ -0.61
LRP1-202ENST00000338962 FCRL3Q96P31 734 aaPredicted RBP11.27□□□□□ -0.61
LRP1-202ENST00000338962 IL12RB2Q99665 862 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 CPNE1Q99829 537 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 CLSTN3Q9BQT9 956 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 TSSK1BQ9BXA7 367 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 IPO11Q9UI26 975 aaKnown RBP11.27□□□□□ -0.61
LRP1-202ENST00000338962 PSAT1Q9Y617 370 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 USH1CQ9Y6N9 552 aa11.27□□□□□ -0.61
LRP1-202ENST00000338962 WASH4PA8MWX3 477 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 TPP1O14773 563 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 CACNG3O60359 315 aa11.26□□□□□ -0.61
LRP1-202ENST00000338962 ALDOAP04075 364 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms