RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 KCNC3Q14003 757 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 HNRNPDQ14103 355 aaKnown RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 PCLAFQ15004 111 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 FASTKD1Q53R41 847 aaKnown RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 RAB6CQ53S08 254 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 PPP6R3Q5H9R7 873 aaPredicted RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 SH2D4BQ5SQS7 431 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 OTUD1Q5VV17 481 aaPredicted RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 PLPP4Q5VZY2 271 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 PGM2L1Q6PCE3 622 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 BEND5Q7L4P6 421 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 CLEC14AQ86T13 490 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 TTC7BQ86TV6 843 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 TMEM135Q86UB9 458 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 ALYREFQ86V81 257 aaKnown RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 TMEM126BQ8IUX1 230 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 ULK2Q8IYT8 1036 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 SLC39A11Q8N1S5 342 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 RBM15BQ8NDT2 890 aaKnown RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 PPP4R1Q8TF05 950 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 RNF139Q8WU17 664 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 IFT43Q96FT9 208 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 CERS2Q96G23 380 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 RBBP8Q99708 897 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 MCMBPQ9BTE3 642 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 DUSP16Q9BY84 665 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 FAM192AQ9GZU8 254 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 RAB6CQ9H0N0 254 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 C12orf65Q9H3J6 166 aaKnown RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 LRRC40Q9H9A6 602 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 CASS4Q9NQ75 786 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 SPATS2LQ9NUQ6 558 aaKnown RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 SPG21Q9NZD8 308 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 IL1RAPL1Q9NZN1 696 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 HACD3Q9P035 362 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 PDP2Q9P2J9 529 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 COPG2Q9UBF2 871 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 TRHDEQ9UKU6 1024 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 ANKRD6Q9Y2G4 727 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 MAD1L1Q9Y6D9 718 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 CDY1Q9Y6F8 540 aa10.99□□□□□ -0.65
RTN3-201ENST00000338850 MYO18AQ92614 2054 aaKnown RBP10.99□□□□□ -0.65
RTN3-201ENST00000338850 MUC6Q6W4X9 2439 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 PTPRDP23468 1912 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 MAGEA13PA6NCF6 341 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 HIDE1A8MVS5 230 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 KPNA7A9QM74 516 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 LOC730098B7Z3J9 87 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 RNF103O00237 685 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 TIMM44O43615 452 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 AHCYL1O43865 530 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 MFSD11O43934 449 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 GRAP2O75791 330 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 KRT36O76013 467 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 AP2A1O95782 977 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 PAX3P23760 479 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 SPRP35270 261 aaPredicted RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 SLC1A6P48664 564 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 NPY2RP49146 381 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 PPIDQ08752 370 aaKnown RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 BMPR2Q13873 1038 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 PDE1CQ14123 709 aaPredicted RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 N4BP2L1Q5TBK1 243 aaPredicted RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 CES4AQ5XG92 561 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 KCTD11Q693B1 232 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 ITPRIPL1Q6GPH6 555 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 TMEM184AQ6ZMB5 413 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 SETD3Q86TU7 594 aaPredicted RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 RNF135Q8IUD6 432 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 SCUBE3Q8IX30 993 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 MPP5Q8N3R9 675 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 CCDC185Q8N715 623 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 OR6B3Q8NGW1 331 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 KCNV2Q8TDN2 545 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 ACTRT2Q8TDY3 377 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 WDR60Q8WVS4 1066 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 HDAC11Q96DB2 347 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 CMTM5Q96DZ9 223 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 P2RY11Q96G91 374 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 PRR11Q96HE9 360 aaPredicted RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 CNDP1Q96KN2 507 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 ZMAT2Q96NC0 199 aaKnown RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 TCF25Q9BQ70 676 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 MRPL9Q9BYD2 267 aaKnown RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 ENTPD7Q9NQZ7 604 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 MUTYHQ9UIF7 546 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 PIN4Q9Y237 131 aaKnown RBP10.98□□□□□ -0.65
RTN3-201ENST00000338850 ASB3Q9Y575 518 aa10.98□□□□□ -0.65
RTN3-201ENST00000338850 ZNF195O14628 629 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 GABRDO14764 452 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 TPP1O14773 563 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 PEX1O43933 1283 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 CACNG3O60359 315 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 UGT1A9O60656 530 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 RECQL4O94761 1208 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 PRKCGP05129 697 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 FESP07332 822 aa10.97□□□□□ -0.65
RTN3-201ENST00000338850 COL6A2P12110 1019 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms