RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 ENTPD7Q9NQZ7 604 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 CHRAC1Q9NRG0 131 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 MKS1Q9NXB0 559 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 ZFATQ9P243 1243 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 PSAT1Q9Y617 370 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 ZFP37Q9Y6Q3 630 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-201ENST00000336128 LINC00271P0C7V0 271 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 CTSAP10619 480 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 NMBRP28336 390 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 WNT3AP56704 352 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 MAXP61244 160 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 HTRA4P83105 476 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-201ENST00000336128 ITKQ08881 620 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 SF3A3Q12874 501 aaKnown RBP eCLIP12.65□□□□□ -0.38
ZNF548-201ENST00000336128 PPIGQ13427 754 aaKnown RBP eCLIP12.65□□□□□ -0.384e-6■■□□□ 12.5
ZNF548-201ENST00000336128 C6orf89Q6UWU4 347 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 TMEM150AQ86TG1 271 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 SPOCK2Q92563 424 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 WBP2Q969T9 261 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 IMP4Q96G21 291 aaKnown RBP12.65□□□□□ -0.38
ZNF548-201ENST00000336128 KIFC1Q9BW19 673 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 FSD1LQ9BXM9 530 aa12.65□□□□□ -0.38
ZNF548-201ENST00000336128 ATXN2Q99700 1313 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 H3BNC9 293 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 PRAMEF11O60813 436 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 FGBP02675 491 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 SPATA31D3P0C874 917 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 MBL2P11226 248 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 GP5P40197 560 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CDH4P55283 916 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 RPS24P62847 133 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 DSC2Q02487 901 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 PCSK7Q16549 785 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 PCID2Q5JVF3 399 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 SPATA31D4Q6ZUB0 917 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 ITIH5Q86UX2 942 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 PGBD5Q8N414 524 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 PPHLN1Q8NEY8 458 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 LRRC8CQ8TDW0 803 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CABS1Q96KC9 395 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 FAM111AQ96PZ2 611 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 SRPK1Q96SB4 655 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CPNE1Q99829 537 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 RETREG1Q9H6L5 497 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 PCMTD2Q9NV79 361 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 STK39Q9UEW8 545 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 SSX2IPQ9Y2D8 614 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 RRP15Q9Y3B9 282 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 WDR91A4D1P6 747 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 SNX3O60493 162 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 F11P03951 625 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CNPP09543 421 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 DHRS4L1P0CG22 281 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 ETFBP38117 255 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CD86P42081 329 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 ETV4P43268 484 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 SGSHP51688 502 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 GNA12Q03113 381 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 IFT88Q13099 833 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 DNAJC3Q13217 504 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 ITIH4Q14624 930 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 LBRQ14739 615 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 TMCO4Q5TGY1 634 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CGB2Q6NT52 195 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 PKN3Q6P5Z2 889 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CDHR3Q6ZTQ4 885 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 SRLQ86TD4 932 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 KCNMB4Q86W47 210 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CCDC117Q8IWD4 279 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 IQCGQ9H095 443 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 MAGEH1Q9H213 219 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 IL21Q9HBE4 155 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 TRPC7Q9HCX4 862 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 C20orf96Q9NUD7 363 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 SMPD4Q9NXE4 827 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 TXNDC16Q9P2K2 825 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 AGO1Q9UL18 857 aaKnown RBP12.64□□□□□ -0.39
ZNF548-201ENST00000336128 PLXNA4Q9HCM2 1894 aa12.64□□□□□ -0.39
ZNF548-201ENST00000336128 CCDC78A2IDD5 438 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 TGM5O43548 720 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 MMP2P08253 660 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 ITGA2BP08514 1039 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 CHRNA4P43681 627 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 POU6F1Q14863 301 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 TEDDM1Q5T9Z0 273 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 GRTP1Q5TC63 336 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 RANBP10Q6VN20 620 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 FAM47EQ6ZV65 393 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 KDELC2Q7Z4H8 507 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 SPATA21Q7Z572 469 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 SLC25A41Q8N5S1 370 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 KLHL23Q8NBE8 558 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 OR7D4Q8NG98 312 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 OR52K2Q8NGK3 314 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 ZNF75CPQ92670 426 aaPredicted RBP12.63□□□□□ -0.39
ZNF548-201ENST00000336128 BADQ92934 168 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 ZFRQ96KR1 1074 aaKnown RBP12.63□□□□□ -0.39
ZNF548-201ENST00000336128 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 PDFQ9HBH1 243 aa12.63□□□□□ -0.39
ZNF548-201ENST00000336128 TCAF1Q9Y4C2 921 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms