RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 WFIKKN2Q8TEU8 576 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 AGAP3Q96P47 875 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 VAT1Q99536 393 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 FERMT1Q9BQL6 677 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 TRIM31Q9BZY9 425 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 FBRSL1Q9HCM7 1045 aaKnown RBP21.9■■□□□ 1.1
TPM1-204ENST00000334895 KLHL8Q9P2G9 620 aaPredicted RBP21.9■■□□□ 1.1
TPM1-204ENST00000334895 ASIC3Q9UHC3 531 aa21.9■■□□□ 1.1
TPM1-204ENST00000334895 ESYT3A0FGR9 886 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 K7ERQ8 282 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 STK10O94804 968 aaKnown RBP21.89■■□□□ 1.09
TPM1-204ENST00000334895 METTL18O95568 372 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 MMP13P45452 471 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 STK19P49842 368 aaPredicted RBP21.89■■□□□ 1.09
TPM1-204ENST00000334895 RENBPP51606 427 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 TUBB4BP68371 445 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 GPS1Q13098 491 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 TXNDC11Q6PKC3 985 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 TERB1Q8NA31 727 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 MYRIPQ8NFW9 859 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 SORCS1Q8WY21 1168 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 SEC14L1Q92503 715 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 PNKPQ96T60 521 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 GORASP1Q9BQQ3 440 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 HEBP1Q9NRV9 189 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 PAK5Q9P286 719 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 TRHDEQ9UKU6 1024 aa21.89■■□□□ 1.09
TPM1-204ENST00000334895 MUC22E2RYF6 1773 aaPredicted RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 SPECC1L-ADORA2AF8WAN1 911 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 SMAD6O43541 496 aaKnown RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 TMCC1O94876 653 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 CTHP32929 405 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 RPL21P46778 160 aaKnown RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 SERPINH1P50454 418 aaKnown RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 GUCY2DQ02846 1103 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 RFTN1Q14699 578 aaPredicted RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 RETSATQ6NUM9 610 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 PID1Q7Z2X4 250 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 NSMCE1Q8WV22 266 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 RPL10LQ96L21 214 aaKnown RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 DPH5Q9H2P9 285 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 NT5MQ9NPB1 228 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 SLC2A4RGQ9NR83 387 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 HS3ST2Q9Y278 367 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 ATP8A1Q9Y2Q0 1164 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 SNX24Q9Y343 169 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 CXorf51AA0A1B0GTR3 108 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 F5H423 210 aaPredicted RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 SRFP11831 508 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 POLR2EP19388 210 aaKnown RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 NFKB1P19838 968 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 ECT2LQ008S8 904 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 SULT2A1Q06520 285 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 PTPRNQ16849 979 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 INO80DQ53TQ3 878 aaPredicted RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 FAXCQ5TGI0 409 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 CCDC70Q6NSX1 233 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 ARHGEF18Q6ZSZ5 1173 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 RNF135Q8IUD6 432 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 TSEN2Q8NCE0 465 aaKnown RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 CYB5D2Q8WUJ1 264 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 MRGPRX3Q96LB0 322 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 PSKH2Q96QS6 385 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 COL25A1Q9BXS0 654 aaPredicted RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 RAB17Q9H0T7 212 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 FCF1Q9Y324 198 aaKnown RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 UTP11Q9Y3A2 253 aaKnown RBP21.88■■□□□ 1.09
TPM1-204ENST00000334895 PIAS3Q9Y6X2 628 aa21.88■■□□□ 1.09
TPM1-204ENST00000334895 F5P12259 2224 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.87■■□□□ 1.09
TPM1-204ENST00000334895 ANTXRLA6NF34 631 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 SHISA7A6NL88 538 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 TP73O15350 636 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 CTIFO43310 598 aaKnown RBP21.87■■□□□ 1.09
TPM1-204ENST00000334895 KAT7O95251 611 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 SRCP12931 536 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 PSMB4P28070 264 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 ADCY8P40145 1251 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 RGRP47804 291 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 GALK1P51570 392 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 MAXP61244 160 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 CCHCR1Q8TD31 782 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 CASKIN2Q8WXE0 1202 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 MYO19Q96H55 970 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 CIPCQ9C0C6 399 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 GBA3Q9H227 469 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 GLOD4Q9HC38 313 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 EPB41L5Q9HCM4 733 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 GDF3Q9NR23 364 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 ELOVL2Q9NXB9 296 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 GRHL1Q9NZI5 618 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 LHX3Q9UBR4 397 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 SEPT3Q9UH03 358 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 HCN2Q9UL51 889 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 ERVW-1Q9UQF0 538 aa21.87■■□□□ 1.09
TPM1-204ENST00000334895 TARSL2A2RTX5 802 aaKnown RBP21.86■■□□□ 1.09
TPM1-204ENST00000334895 ZNF821O75541 412 aaPredicted RBP21.86■■□□□ 1.09
TPM1-204ENST00000334895 GJB3O75712 270 aa21.86■■□□□ 1.09
TPM1-204ENST00000334895 ACTN2P35609 894 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms