RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 BCO2Q9BYV7 579 aa13.95□□□□□ -0.18
SYNE3-201ENST00000334258 COL2A1P02458 1487 aaPredicted RBP13.94□□□□□ -0.18
SYNE3-201ENST00000334258 EIF3FO00303 357 aaPredicted RBP13.94□□□□□ -0.18
SYNE3-201ENST00000334258 ACOT8O14734 319 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 JUNP05412 331 aaKnown RBP13.94□□□□□ -0.18
SYNE3-201ENST00000334258 GJB1P08034 283 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 GOT1P17174 413 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 AVPR1AP37288 418 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 NR2C2P49116 596 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 PRKAA1Q13131 559 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 CBLBQ13191 982 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 LRRC8EQ6NSJ5 796 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 C7orf31Q8N865 590 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 CDCA5Q96FF9 252 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 BIRC8Q96P09 236 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 FCRL3Q96P31 734 aaPredicted RBP13.94□□□□□ -0.18
SYNE3-201ENST00000334258 CSPG4P5Q96PW8 444 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 APBA2Q99767 749 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 ZNF112Q9UJU3 913 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 SAC3D1A6NKF1 404 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 PLOD2O00469 737 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 PHGDHO43175 533 aaKnown RBP13.94□□□□□ -0.18
SYNE3-201ENST00000334258 B4GALT4O60513 344 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 ALDH3B2P48448 385 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 LIMK2P53671 638 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 DPYSQ14117 519 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 TRIM25Q14258 630 aaKnown RBP13.94□□□□□ -0.18
SYNE3-201ENST00000334258 DGKDQ16760 1214 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 LY6KQ17RY6 165 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 PYROXD2Q8N2H3 581 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
SYNE3-201ENST00000334258 LPGAT1Q92604 370 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 ZBTB26Q9HCK0 441 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 OLAHQ9NV23 265 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 TBCCD1Q9NVR7 557 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 BFARQ9NZS9 450 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 MID2Q9UJV3 735 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 VPS28Q9UK41 221 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 COPG1Q9Y678 874 aaKnown RBP13.94□□□□□ -0.18
SYNE3-201ENST00000334258 LTBP3Q9NS15 1303 aa13.94□□□□□ -0.18
SYNE3-201ENST00000334258 KCNK1O00180 336 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 PSMD12O00232 456 aaPredicted RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 MDM4O15151 490 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 XPOTO43592 962 aaKnown RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 TXNL4AP83876 142 aaKnown RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 Q6ZNX1 250 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 C12orf43Q96C57 262 aaKnown RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 P2RY11Q96G91 374 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 ZNF597Q96LX8 424 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 APOL2Q9BQE5 337 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 ACAD9Q9H845 621 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 OXSMQ9NWU1 459 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 GTSE1Q9NYZ3 720 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 SELENONQ9NZV5 590 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 KLHL8Q9P2G9 620 aaPredicted RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 CDC14AQ9UNH5 594 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 TMEM247A6NEH6 219 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 LACTBL1A8MY62 500 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 E7ENX8 843 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 CBFA2T3O75081 653 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 H2AFYO75367 372 aaKnown RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 TIPRLO75663 272 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 MPOP05164 745 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 CYP3A5P20815 502 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 ETFBP38117 255 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 SLC6A3Q01959 620 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 JADE1Q6IE81 842 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 REPS2Q8NFH8 660 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 ISOC1Q96CN7 298 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 SGF29Q96ES7 293 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 GBA2Q9HCG7 927 aaPredicted RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 HOXC10Q9NYD6 342 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 HESX1Q9UBX0 185 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 SLC8A2Q9UPR5 921 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 AURKCQ9UQB9 309 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 SNX9Q9Y5X1 595 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 A0A087WXM4 84 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 TMEM233B4DJY2 109 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 GPR25O00155 361 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 GRID2O43424 1007 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 TPST1O60507 370 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 CD97P48960 835 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 ATP1A4Q13733 1029 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 USP10Q14694 798 aaKnown RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 STXBP2Q15833 593 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 SPANXN3Q5MJ09 141 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 COPS5Q92905 334 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 ASB9Q96DX5 294 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 DRC3Q9H069 523 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 LRRC40Q9H9A6 602 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 TRPC7Q9HCX4 862 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 IARS2Q9NSE4 1012 aaKnown RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 UTP6Q9NYH9 597 aaKnown RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 IGSF9Q9P2J2 1179 aa13.93□□□□□ -0.18
SYNE3-201ENST00000334258 RUVBL2Q9Y230 463 aaKnown RBP13.93□□□□□ -0.18
SYNE3-201ENST00000334258 PSME4Q14997 1843 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 TCAF2A6NFQ2 919 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 TADA2AO75478 443 aa13.92□□□□□ -0.18
SYNE3-201ENST00000334258 HMOX2P30519 316 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms