RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 SAP25Q8TEE9 199 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 RXFP2Q8WXD0 754 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 NTAN1Q96AB6 310 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 C11orf70Q9BRQ4 267 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 HDAC8Q9BY41 377 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 NLRC4Q9NPP4 1024 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 TMEM248Q9NWD8 314 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 APC2O95996 2303 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 MYLKQ15746 1914 aa13.88□□□□□ -0.19
GTF3C6-201ENST00000329970 SRRM3A6NNA2 597 aaPredicted RBP13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 SMAD6O43541 496 aaKnown RBP13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 SRGAP2O75044 1071 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 ZNF821O75541 412 aaPredicted RBP13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 MBD3O95983 291 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 CALB1P05937 261 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 CDK4P11802 303 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 RHOQP17081 205 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 RRM1P23921 792 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 EPHA8P29322 1005 aaPredicted RBP13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 NSFP46459 744 aaKnown RBP13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 ARF5P84085 180 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 ATP11AP98196 1134 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 SCAPQ12770 1279 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 NCAPHQ15003 741 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 SMAD1Q15797 465 aaKnown RBP13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 CLEC16AQ2KHT3 1053 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 SFMBT2Q5VUG0 894 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 ZSCAN30Q86W11 494 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 NLRP14Q86W24 1093 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 TMEM145Q8NBT3 493 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 C3orf20Q8ND61 904 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 NEK11Q8NG66 645 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 OR7D4Q8NG98 312 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 FAM174AQ8TBP5 190 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 ISG20Q96AZ6 181 aaKnown RBP13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 PPP1R16AQ96I34 528 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 PCDHB18PQ96TA0 734 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 HSD3B7Q9H2F3 369 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 ATP13A1Q9HD20 1204 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 DKK4Q9UBT3 224 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 FTSJ1Q9UET6 329 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 OR12D3Q9UGF7 316 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 IL36AQ9UHA7 158 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 NEU3Q9UQ49 428 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 WASF2Q9Y6W5 498 aa13.87□□□□□ -0.19
GTF3C6-201ENST00000329970 TCRBV5S1A1TA0A578 114 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 K7ERQ8 282 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 CBX4O00257 560 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 PLK4O00444 970 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 CD160O95971 181 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 C1SP09871 688 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 KRT3P12035 628 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 GLDCP23378 1020 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 RECQLP46063 649 aaPredicted RBP13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 AIF1P55008 147 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 HDAC4P56524 1084 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 GEMIN4P57678 1058 aaKnown RBP13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 STAT4Q14765 748 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 C15orf59Q2T9L4 293 aaPredicted RBP13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 DPY19L3Q6ZPD9 716 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 ERN2Q76MJ5 926 aaKnown RBP13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 MON1BQ7L1V2 547 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 KANSL1Q7Z3B3 1105 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 PROSER1Q86XN7 944 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 SPATS2Q86XZ4 545 aaKnown RBP13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 JOSD2Q8TAC2 188 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 SLC30A5Q8TAD4 765 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 ARRDC3Q96B67 414 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 LRIG1Q96JA1 1093 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 MAGEH1Q9H213 219 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 DYRK4Q9NR20 520 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 ADAM22Q9P0K1 906 aa13.86□□□□□ -0.19
GTF3C6-201ENST00000329970 SIGLEC16A6NMB1 481 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 KPNA3O00505 521 aaPredicted RBP13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 AP1G1O43747 822 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 BNIP3LO60238 219 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 ITGAVP06756 1048 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 CCDC172P0C7W6 258 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 ITGB7P26010 798 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 NEK3P51956 506 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 IL9RQ01113 521 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 UBXN1Q04323 297 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 CDO1Q16878 200 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 CARD16Q5EG05 197 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 CCDC183Q5T5S1 534 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 PPP1R2P3Q6NXS1 205 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 LINGO4Q6UY18 593 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 HORMAD1Q86X24 394 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 CHST14Q8NCH0 376 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 ARHGEF2Q92974 986 aaKnown RBP13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 TBC1D31Q96DN5 1066 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 HEPHQ9BQS7 1158 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 SELENOOQ9BVL4 669 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 MYO6Q9UM54 1294 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 LAMA5O15230 3695 aa13.85□□□□□ -0.19
GTF3C6-201ENST00000329970 ADAMTS20P59510 1910 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 ENC1O14682 589 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 LEFTY1O75610 366 aa13.84□□□□□ -0.19
GTF3C6-201ENST00000329970 LRIG2O94898 1065 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms