RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 LBRQ14739 615 aaKnown RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 MARC1Q5VT66 337 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 ADIPOR2Q86V24 386 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 CCDC117Q8IWD4 279 aaPredicted RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 CYB5D2Q8WUJ1 264 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 ZBTB9Q96C00 473 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 SNF8Q96H20 258 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 NSMCE3Q96MG7 304 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 BRD8Q9H0E9 1235 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 BRD9Q9H8M2 597 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 HOXC11O43248 304 aaPredicted RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 NARSO43776 548 aaKnown RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 ACTN2P35609 894 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 IFI35P80217 286 aaPredicted RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 PDGFRLQ15198 375 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 TIGD7Q6NT04 549 aaPredicted RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 SYDE1Q6ZW31 735 aaPredicted RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 IFT20Q8IY31 132 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 MAFAQ8NHW3 353 aaPredicted RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 NXPE3Q969Y0 559 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 ZDHHC18Q9NUE0 388 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 PAK5Q9P286 719 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 COL4A3Q01955 1670 aa15.56■□□□□ 0.08
PRPF3-201ENST00000324862 MYO18AQ92614 2054 aaKnown RBP15.56■□□□□ 0.08
PRPF3-201ENST00000324862 PRRT4C9JH25 899 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 DNALI1O14645 258 aaPredicted RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 CHADO15335 359 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 APRTP07741 180 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 MMP13P45452 471 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 DGKGP49619 791 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 ITKQ08881 620 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 HNRNPDQ14103 355 aaKnown RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 CYTH1Q15438 398 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 LEXMQ3ZCV2 418 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 RNASEH2BQ5TBB1 312 aaKnown RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 CCNI2Q6ZMN8 369 aaPredicted RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 MTSS1LQ765P7 747 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 E2F7Q96AV8 911 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 OXNAD1Q96HP4 312 aaPredicted RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 RETREG1Q9H6L5 497 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 UBA2Q9UBT2 640 aaPredicted RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 RSPH14Q9UHP6 348 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 SLCO3A1Q9UIG8 710 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 FBXO10Q9UK96 956 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 HPCAL4Q9UM19 191 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 CHD5Q8TDI0 1954 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 USP12O75317 370 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 OPRD1P41143 372 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 DSC2Q02487 901 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 WDR93Q6P2C0 686 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 KDELC2Q7Z4H8 507 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 SLC44A3Q8N4M1 653 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 PDCD7Q8N8D1 485 aaKnown RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 DCAF4L2Q8NA75 395 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 MLPHQ9BV36 600 aaPredicted RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 RAB21Q9UL25 225 aa15.55■□□□□ 0.08
PRPF3-201ENST00000324862 TPX2Q9ULW0 747 aaKnown RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 FARP1Q9Y4F1 1045 aaPredicted RBP15.55■□□□□ 0.08
PRPF3-201ENST00000324862 BPTFQ12830 3046 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 OPHN1O60890 802 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 BANF1O75531 89 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 TMCC1O94876 653 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 TUBB4BP68371 445 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 ZNF33AQ06730 810 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 NIPAL4Q0D2K0 466 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 HP1BP3Q5SSJ5 553 aaPredicted RBP15.54■□□□□ 0.08
PRPF3-201ENST00000324862 TMCO4Q5TGY1 634 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 ZNF783Q6ZMS7 281 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 LRRC49Q8IUZ0 686 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 OR6K2Q8NGY2 324 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 ERLEC1Q96DZ1 483 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 RBM15Q96T37 977 aaKnown RBP eCLIP15.54■□□□□ 0.088e-7■□□□□ 8.8
PRPF3-201ENST00000324862 APOL2Q9BQE5 337 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 TM6SF2Q9BZW4 377 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 CIPCQ9C0C6 399 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 AVILO75366 819 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 STK10O94804 968 aaKnown RBP15.54■□□□□ 0.08
PRPF3-201ENST00000324862 RENBPP51606 427 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 UBAP2Q5T6F2 1119 aaKnown RBP15.54■□□□□ 0.08
PRPF3-201ENST00000324862 MBLAC2Q68D91 279 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 HIBCHQ6NVY1 386 aaPredicted RBP15.54■□□□□ 0.08
PRPF3-201ENST00000324862 FBXO38Q6PIJ6 1188 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 TXNDC11Q6PKC3 985 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 TEX26Q8N6G2 289 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 ZNF366Q8N895 744 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 NAT8LQ8N9F0 302 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 ART4Q93070 314 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 XPO6Q96QU8 1125 aaKnown RBP15.54■□□□□ 0.08
PRPF3-201ENST00000324862 C2orf49Q9BVC5 232 aaPredicted RBP15.54■□□□□ 0.08
PRPF3-201ENST00000324862 TNKS2Q9H2K2 1166 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 MTG2Q9H4K7 406 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 ANAPC5Q9UJX4 755 aa15.54■□□□□ 0.08
PRPF3-201ENST00000324862 BNIP3LO60238 219 aa15.53■□□□□ 0.08
PRPF3-201ENST00000324862 NEBLO76041 1014 aa15.53■□□□□ 0.08
PRPF3-201ENST00000324862 CALCOCO2Q13137 446 aa15.53■□□□□ 0.08
PRPF3-201ENST00000324862 KCNJ11Q14654 390 aa15.53■□□□□ 0.08
PRPF3-201ENST00000324862 ATXN7L2Q5T6C5 722 aaPredicted RBP15.53■□□□□ 0.08
PRPF3-201ENST00000324862 CPA6Q8N4T0 437 aa15.53■□□□□ 0.08
PRPF3-201ENST00000324862 PRCCQ92733 491 aaPredicted RBP15.53■□□□□ 0.08
PRPF3-201ENST00000324862 FERMT1Q9BQL6 677 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms