RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 HABP4Q5JVS0 413 aaKnown RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 DPY19L2P1Q6NXN4 242 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 TMEM26Q6ZUK4 368 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 NIPA1Q7RTP0 329 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 CDR2LQ86X02 465 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 ADGRG5Q8IZF4 528 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 LEMD2Q8NC56 503 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 CDKL2Q92772 493 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 CBWD1Q9BRT8 395 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 FOXP3Q9BZS1 431 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 DNMT3BQ9UBC3 853 aaKnown RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 ZC3H7BQ9UGR2 993 aaKnown RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 PRR23AA6NEV1 266 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 KPNA4O00629 521 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 CFLARO15519 480 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 MSI1O43347 362 aaKnown RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 KCNH1O95259 989 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 SLC25A27O95847 323 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 IFNB1P01574 187 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 TRIM49P0CI25 452 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 TRIM49CP0CI26 452 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 MCF2P10911 925 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 TCN1P20061 433 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 JAK3P52333 1124 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 GPR85P60893 370 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 GPC5P78333 572 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 CAV1Q03135 178 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 BST1Q10588 318 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 PON2Q15165 354 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 MAPK11Q15759 364 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 AGAP7PQ5VUJ5 663 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 TRIM72Q6ZMU5 477 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 RASAL3Q86YV0 1011 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 FIG4Q92562 907 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 RMND5BQ96G75 393 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 TOE1Q96GM8 510 aaKnown RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 ZNF641Q96N77 438 aaPredicted RBP10.47□□□□□ -0.73
SF3B2-201ENST00000322535 ALPK1Q96QP1 1244 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 SLC13A1Q9BZW2 595 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 ARHGAP39Q9C0H5 1083 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 MYRFQ9Y2G1 1151 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 RNF11Q9Y3C5 154 aa10.47□□□□□ -0.73
SF3B2-201ENST00000322535 CYB561D2O14569 222 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 SLC9A3R1O14745 358 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-201ENST00000322535 EPN2O95208 641 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 NR3C1P04150 777 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 SUPT20HL2P0C7V6 817 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 MYL6P60660 151 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 COPZ1P61923 177 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 C19orf57Q0VDD7 668 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 CHI3L2Q15782 390 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 INAVAQ3KP66 663 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 PPP1R26Q5T8A7 1209 aaPredicted RBP10.46□□□□□ -0.73
SF3B2-201ENST00000322535 ZNF786Q8N393 782 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 CATSPER1Q8NEC5 780 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 JADE3Q92613 823 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 PAFAH2Q99487 392 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 CCDC106Q9BWC9 280 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 FANCFQ9NPI8 374 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 POLE4Q9NR33 117 aa10.46□□□□□ -0.73
SF3B2-201ENST00000322535 SF3B1O75533 1304 aaKnown RBP eCLIP10.46□□□□□ -0.736e-7■■■■■ 47.6
SF3B2-201ENST00000322535 RBBP6Q7Z6E9 1792 aaKnown RBP10.46□□□□□ -0.73
SF3B2-201ENST00000322535 DNAJC25-GNG10A0A024R161 153 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 FOXN3O00409 490 aaPredicted RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 AOC2O75106 756 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 H6PDO95479 791 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 SNRPAP09012 282 aaKnown RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 PTPN1P18031 435 aaKnown RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 ATF6P18850 670 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 ALDH3B2P48448 385 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 STAT5BP51692 787 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 USP41Q3LFD5 358 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 HAUS6Q7Z4H7 955 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 C4orf19Q8IY42 314 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 CPA6Q8N4T0 437 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 ZSCAN18Q8TBC5 510 aaPredicted RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 ZNF564Q8TBZ8 553 aaPredicted RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 INTS12Q96CB8 462 aaKnown RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 RBM14Q96PK6 669 aaKnown RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 CLSTN3Q9BQT9 956 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 ZSCAN5AQ9BUG6 496 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 KATNAL1Q9BW62 490 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 MROQ9BYG7 248 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 GCOM2Q9BZD3 368 aaPredicted RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 CXorf21Q9HAI6 301 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 C17orf75Q9HAS0 396 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 UBA2Q9UBT2 640 aaPredicted RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 PSMD13Q9UNM6 376 aa10.46□□□□□ -0.74
SF3B2-201ENST00000322535 MYH9P35579 1960 aaKnown RBP10.46□□□□□ -0.74
SF3B2-201ENST00000322535 STBD1O95210 358 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 EPHA3P29320 983 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 SFNP31947 248 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 NPTX2P47972 431 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 HCAR3P49019 387 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 DLG4P78352 724 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 GPS1Q13098 491 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 RGMBQ6NW40 437 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 CCNYL1Q8N7R7 359 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 CCDC89Q8N998 374 aa10.45□□□□□ -0.74
SF3B2-201ENST00000322535 MARC2Q969Z3 335 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms