RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 VPS39Q96JC1 886 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 ANKRD60Q9BZ19 345 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 BFARQ9NZS9 450 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 VANGL2Q9ULK5 521 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 DOLKQ9UPQ8 538 aa18.16■□□□□ 0.5
PRKCB-202ENST00000321728 ANK1P16157 1881 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 A0A087WXM4 84 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 TMX2-CTNND1H3BSU7 103 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 TIPRLO75663 272 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 STAMBPO95630 424 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 AVPR1AP37288 418 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 ZBED5Q49AG3 693 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 TTC33Q6PID6 262 aaPredicted RBP18.15■□□□□ 0.5
PRKCB-202ENST00000321728 MAMDC4Q6UXC1 1216 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 FASTKD5Q7L8L6 764 aaKnown RBP18.15■□□□□ 0.5
PRKCB-202ENST00000321728 ACOT1Q86TX2 421 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 CPNE9Q8IYJ1 553 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 EFHD1Q9BUP0 239 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 IL22Q9GZX6 179 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 MRPL40Q9NQ50 206 aaKnown RBP18.15■□□□□ 0.5
PRKCB-202ENST00000321728 IARS2Q9NSE4 1012 aaKnown RBP18.15■□□□□ 0.5
PRKCB-202ENST00000321728 RUVBL2Q9Y230 463 aaKnown RBP18.15■□□□□ 0.5
PRKCB-202ENST00000321728 CENPFP49454 3210 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 HEATR9A2RTY3 570 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 GIPC1O14908 333 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 SEC24DO94855 1032 aaPredicted RBP18.15■□□□□ 0.5
PRKCB-202ENST00000321728 HMOX2P30519 316 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 REPS2Q8NFH8 660 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 CXorf38Q8TB03 319 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 VPS50Q96JG6 964 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 TRPC7Q9HCX4 862 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 KIAA1257Q9ULG3 409 aa18.15■□□□□ 0.5
PRKCB-202ENST00000321728 CNOT6Q9ULM6 557 aaKnown RBP18.15■□□□□ 0.5
PRKCB-202ENST00000321728 KCNK1O00180 336 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 AKAP10O43572 662 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 CABYRO75952 493 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 FUT4P22083 530 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 SLC7A1P30825 629 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 EPHX2P34913 555 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 CTBSQ01459 385 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 EML3Q32P44 896 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 GRAMD4Q6IC98 578 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 HMBOX1Q6NT76 420 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 LAYNQ6UX15 382 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 TMEM110Q86TL2 294 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 KCNMB4Q86W47 210 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 LSMEM2Q8N112 164 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 PBXIP1Q96AQ6 731 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 COX4I2Q96KJ9 171 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 UNC93B1Q9H1C4 597 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 UTP6Q9NYH9 597 aaKnown RBP18.14■□□□□ 0.49
PRKCB-202ENST00000321728 KLHL8Q9P2G9 620 aaPredicted RBP18.14■□□□□ 0.49
PRKCB-202ENST00000321728 IPO11Q9UI26 975 aaKnown RBP18.14■□□□□ 0.49
PRKCB-202ENST00000321728 PRORSD1PA6NEY8 169 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 SOCS2O14508 198 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 DDHD2O94830 711 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 FARP2O94887 1054 aaPredicted RBP18.14■□□□□ 0.49
PRKCB-202ENST00000321728 INCA1Q0VD86 236 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 NHSL2Q5HYW2 709 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 LRRC8EQ6NSJ5 796 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 CHSY3Q70JA7 882 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 FAM131BQ86XD5 332 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 ZNF513Q8N8E2 541 aaPredicted RBP18.14■□□□□ 0.49
PRKCB-202ENST00000321728 SLC7A14Q8TBB6 771 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 RDH11Q8TC12 318 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 KCTD4Q8WVF5 259 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 RSPH1Q8WYR4 309 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 HIPK3Q9H422 1215 aa18.14■□□□□ 0.49
PRKCB-202ENST00000321728 DUS2Q9NX74 493 aaKnown RBP18.14■□□□□ 0.49
PRKCB-202ENST00000321728 ZCWPW2A0A1B0GU75 182 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 KANSL1LA0AUZ9 987 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 CCDC78A2IDD5 438 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 SAC3D1A6NKF1 404 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 ZNF839A8K0R7 811 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 ZNF189O75820 626 aaPredicted RBP18.13■□□□□ 0.49
PRKCB-202ENST00000321728 GABBR2O75899 941 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 GNAO1P09471 354 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 SBK3P0C264 359 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 DPEP1P16444 411 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 HDCP19113 662 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 PTPN9P43378 593 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 GRM3Q14832 879 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 UNKQ9C0B0 810 aaKnown RBP18.13■□□□□ 0.49
PRKCB-202ENST00000321728 FZD8Q9H461 694 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 PRDM12Q9H4Q4 367 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 MINDY3Q9H8M7 445 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 TUBGCP4Q9UGJ1 667 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 ICAM3P32942 547 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 BACE1P56817 501 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 STX5Q13190 355 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 USP10Q14694 798 aaKnown RBP18.13■□□□□ 0.49
PRKCB-202ENST00000321728 ANO4Q32M45 955 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 DLK2Q6UY11 383 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 NCCRP1Q6ZVX7 275 aaPredicted RBP18.13■□□□□ 0.49
PRKCB-202ENST00000321728 TMEM135Q86UB9 458 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 TMEM151AQ8N4L1 468 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 TEX13BQ9BXU2 312 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 R3HDMLQ9H3Y0 253 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 INIPQ9NRY2 104 aa18.13■□□□□ 0.49
PRKCB-202ENST00000321728 GTSE1Q9NYZ3 720 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms