RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 CNTN1Q12860 1018 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 ELAVL3Q14576 367 aaKnown RBP13.56□□□□□ -0.24
SYCN-201ENST00000318438 STILQ15468 1287 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 DEFB133Q30KQ1 61 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 FSCBQ5H9T9 825 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 PITRM1Q5JRX3 1037 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 MPP7Q5T2T1 576 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 RBM43Q6ZSC3 357 aaKnown RBP13.56□□□□□ -0.24
SYCN-201ENST00000318438 RRAGAQ7L523 313 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 RAB11FIP2Q7L804 512 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 BHLHA9Q7RTU4 235 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 ARHGEF19Q8IW93 802 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 FAM114A1Q8IWE2 563 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 FIBINQ8TAL6 211 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 KAT5Q92993 513 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 MYEOVQ96EZ4 313 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 SEPT10Q9P0V9 454 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 SARDHQ9UL12 918 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 HBS1LQ9Y450 684 aaKnown RBP13.56□□□□□ -0.24
SYCN-201ENST00000318438 CEP83Q9Y592 693 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 PCDHB4Q9Y5E5 795 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 ITPR3Q14573 2671 aa13.56□□□□□ -0.24
SYCN-201ENST00000318438 DOCK9Q9BZ29 2069 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 GTPBP10A4D1E9 387 aaKnown RBP13.55□□□□□ -0.24
SYCN-201ENST00000318438 SLC7A4O43246 635 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 RNGTTO60942 597 aaKnown RBP13.55□□□□□ -0.24
SYCN-201ENST00000318438 LATS1O95835 1130 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 ZBED1O96006 694 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 SRPRAP08240 638 aaKnown RBP13.55□□□□□ -0.24
SYCN-201ENST00000318438 SETSIPP0DME0 302 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 TKTL1P51854 596 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 POLE2P56282 527 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 HNRNPKP61978 463 aaKnown RBP eCLIP13.55□□□□□ -0.24
SYCN-201ENST00000318438 ECT2LQ008S8 904 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 SPIDRQ14159 915 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 NR0B2Q15466 257 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 FAM133BQ5BKY9 247 aaKnown RBP13.55□□□□□ -0.24
SYCN-201ENST00000318438 OR6B2Q6IFH4 312 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 TRIM65Q6PJ69 517 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 GCNT7Q6ZNI0 430 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 ENOSF1Q7L5Y1 443 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 DSG4Q86SJ6 1040 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 ZFAND4Q86XD8 727 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 CARNMT1Q8N4J0 409 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 EDEM1Q92611 657 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 FAM81BQ96LP2 452 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
SYCN-201ENST00000318438 KREMEN1Q96MU8 473 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 PISDQ9UG56 409 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 ANAPC2Q9UJX6 822 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 CNTN6Q9UQ52 1028 aa13.55□□□□□ -0.24
SYCN-201ENST00000318438 A0A1W2PQU0 124 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 AGRPO00253 132 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 MTIF2P46199 727 aaKnown RBP13.54□□□□□ -0.24
SYCN-201ENST00000318438 TAS2R38P59533 333 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 RPS24P62847 133 aaKnown RBP13.54□□□□□ -0.24
SYCN-201ENST00000318438 MAN2A1Q16706 1144 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 EXOC3L4Q17RC7 722 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 RNF219Q5W0B1 726 aaPredicted RBP13.54□□□□□ -0.24
SYCN-201ENST00000318438 BORAQ6PGQ7 559 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 LCLAT1Q6UWP7 414 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 GBP6Q6ZN66 633 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 TFAP2BQ92481 460 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 IFT43Q96FT9 208 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 CCDC3Q9BQI4 270 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 ULBP1Q9BZM6 244 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 FOXP3Q9BZS1 431 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 ZNF71Q9NQZ8 489 aaPredicted RBP13.54□□□□□ -0.24
SYCN-201ENST00000318438 OLA1Q9NTK5 396 aaKnown RBP13.54□□□□□ -0.24
SYCN-201ENST00000318438 APEX2Q9UBZ4 518 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 CACNA1DQ01668 2161 aa13.54□□□□□ -0.24
SYCN-201ENST00000318438 PRAMEF33A0A0G2JMD5 474 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 RNF225M0QZC1 329 aaPredicted RBP13.53□□□□□ -0.24
SYCN-201ENST00000318438 TULP2O00295 520 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 PRAMEF10O60809 474 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 GABBR2O75899 941 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 MBD3O95983 291 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 AKT2P31751 481 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 CDH18Q13634 790 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 FZD2Q14332 565 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 CNGA2Q16280 664 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 ZNF284Q2VY69 593 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 ZNF787Q6DD87 383 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 SMYD5Q6GMV2 418 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 Q6ZSR6 202 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 PTAR1Q7Z6K3 402 aaPredicted RBP13.53□□□□□ -0.24
SYCN-201ENST00000318438 ABI3BPQ7Z7G0 1075 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 SLC35F3Q8IY50 421 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 APCDD1Q8J025 514 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 ZNF557Q8N988 423 aaPredicted RBP13.53□□□□□ -0.24
SYCN-201ENST00000318438 HJURPQ8NCD3 748 aaPredicted RBP13.53□□□□□ -0.24
SYCN-201ENST00000318438 LMX1AQ8TE12 382 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 RNF139Q8WU17 664 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 KCTD13Q8WZ19 329 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 MIB2Q96AX9 1013 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 PPP1R13BQ96KQ4 1090 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 SPAG5Q96R06 1193 aa13.53□□□□□ -0.24
SYCN-201ENST00000318438 ZSWIM1Q9BR11 485 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms