RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 DDHD1Q8NEL9 900 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 KCTD4Q8WVF5 259 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 SLCO4A1Q96BD0 722 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 PLEKHA8Q96JA3 519 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 RBBP8Q99708 897 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 TBCCD1Q9NVR7 557 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 GGA3Q9NZ52 723 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 CNOT6Q9ULM6 557 aaKnown RBP9.81□□□□□ -0.84
PTPRA-202ENST00000318266 PADI4Q9UM07 663 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 AP4E1Q9UPM8 1137 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 RAP2CQ9Y3L5 183 aa9.81□□□□□ -0.84
PTPRA-202ENST00000318266 A0A0A0MRY4 1105 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 KANSL1LA0AUZ9 987 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CBFA2T3O75081 653 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CILPO75339 1184 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 SPRP35270 261 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 NME5P56597 212 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 MLLT1Q03111 559 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 PMS2P3Q13401 168 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 NANOGP8Q6NSW7 305 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 PID1Q7Z2X4 250 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 TMEM126BQ8IUX1 230 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 OR9I1Q8NGQ6 314 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 NSUN6Q8TEA1 469 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CANT1Q8WVQ1 401 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 DCPSQ96C86 337 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 FBXL20Q96IG2 436 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 RPL10LQ96L21 214 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 SPATA13Q96N96 652 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CSPG4P5Q96PW8 444 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 POLR1BQ9H9Y6 1135 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 IARS2Q9NSE4 1012 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 UBP1Q9NZI7 540 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 RBMX2Q9Y388 322 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 PCDHGA7Q9Y5G6 932 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 RNF103-CHMP3A0A140T963 221 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 C9JVG2 144 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 WDR46O15213 610 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 MFSD11O43934 449 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 PEX10O60683 326 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CCDC130P13994 396 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 ZNF182P17025 639 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 HMOX2P30519 316 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 TRAF2Q12933 501 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 BTG3Q14201 252 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 AGKQ53H12 422 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 DCDC5Q6ZRR9 648 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 ALDH16A1Q8IZ83 802 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 C7orf31Q8N865 590 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 TRAPPC12Q8WVT3 735 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 SLC35B4Q969S0 331 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 ASB9Q96DX5 294 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 P2RY11Q96G91 374 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CNDP1Q96KN2 507 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 QKIQ96PU8 341 aaKnown RBP eCLIP9.8□□□□□ -0.847e-12■■■■■ 74.3
PTPRA-202ENST00000318266 PPP1R10Q96QC0 940 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CPNE1Q99829 537 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 GPATCH1Q9BRR8 931 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 TRIM8Q9BZR9 551 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 SMOXQ9NWM0 555 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 OXSMQ9NWU1 459 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 DUS2Q9NX74 493 aaKnown RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 TRIM17Q9Y577 477 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 H3BMQ9 156 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 GPR25O00155 361 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 LIMK2P53671 638 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 PPP1R3AQ16821 1122 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CERCAMQ5T4B2 595 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 COG8Q96MW5 612 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 KCTD15Q96SI1 283 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 ZNF670Q9BS34 389 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 CYP4F12Q9HCS2 524 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 RNF19AQ9NV58 838 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 TLK1Q9UKI8 766 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 SLC8A2Q9UPR5 921 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 TLL2Q9Y6L7 1015 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 SQORQ9Y6N5 450 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 COL11A2P13942 1736 aaPredicted RBP9.8□□□□□ -0.84
PTPRA-202ENST00000318266 LTBP1Q14766 1721 aa9.8□□□□□ -0.84
PTPRA-202ENST00000318266 ATP6AP2A0A1C7CYW4 349 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 NEMP2A6NFY4 417 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 TMEM114B3SHH9 223 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 ATP6AP2O75787 350 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 MT-ND1P03886 318 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 HOXD12P35452 270 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 TMED10P49755 219 aaKnown RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 NUMBP49757 651 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 EIF2B2P49770 351 aaKnown RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 PHEXP78562 749 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 RHDQ02161 417 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 ITGADQ13349 1161 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 CYP2A13Q16696 494 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 GRTP1Q5TC63 336 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 NCBP2-AS2Q69YL0 99 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 JADE1Q6IE81 842 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 TMEM53Q6P2H8 277 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 LYSMD3Q7Z3D4 306 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 ACOT1Q86TX2 421 aa9.79□□□□□ -0.84
PTPRA-202ENST00000318266 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
PTPRA-202ENST00000318266 DQX1Q8TE96 717 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms