RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 FRMD8P1Q9BZ68 369 aaPredicted RBP15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 DRG1Q9Y295 367 aaKnown RBP15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 SNX24Q9Y343 169 aa15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 MYO18AQ92614 2054 aaKnown RBP15.68■□□□□ 0.1
PDLIM5-202ENST00000318007 EFCAB8A8MWE9 144 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 WASH3PC4AMC7 463 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 ZMPSTE24O75844 475 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 METTL18O95568 372 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 BMP1P13497 986 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 NFKB1P19838 968 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 PSMB4P28070 264 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 WASP42768 502 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 RGRP47804 291 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 ECT2LQ008S8 904 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 DHX34Q14147 1143 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 PGBD5Q8N414 524 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 SPATA22Q8NHS9 363 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 P2RY13Q9BPV8 354 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 FERMT1Q9BQL6 677 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 EPB41L5Q9HCM4 733 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 RAB6BQ9NRW1 208 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 PIH1D1Q9NWS0 290 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 NDRG2Q9UN36 371 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 CHD5Q8TDI0 1954 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 F5P12259 2224 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 A0A0A0MRY4 1105 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 GOLGA8MH3BSY2 632 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 STK10O94804 968 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 MT-CYBP00156 380 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 HLA-EP13747 358 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 STIP1P31948 543 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 GKP32189 559 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 CD68P34810 354 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 TEX44Q53QW1 395 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 TMCO4Q5TGY1 634 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 ZNF783Q6ZMS7 281 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 TPRG1Q6ZUI0 275 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 GSPT2Q8IYD1 628 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 RYBPQ8N488 228 aaPredicted RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 IFT81Q8WYA0 676 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 SPATA13Q96N96 652 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 TSGA13Q96PP4 275 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 CD320Q9NPF0 282 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 RSPH14Q9UHP6 348 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 SLC25A13Q9UJS0 675 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 FBXO10Q9UK96 956 aa15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 UTP11Q9Y3A2 253 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-202ENST00000318007 WDFY4Q6ZS81 3184 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 TTC34A8MYJ7 566 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 SRFP11831 508 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 SERPINH1P50454 418 aaKnown RBP15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 SCNN1BP51168 640 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 DSC2Q02487 901 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 LMNB2Q03252 620 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 ELF2Q15723 593 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 PCSK7Q16549 785 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 C2orf27AQ580R0 203 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 RETSATQ6NUM9 610 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 CACUL1Q86Y37 369 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 KIAA1958Q8N8K9 716 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 ASB2Q96Q27 587 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 RBM15Q96T37 977 aaKnown RBP eCLIP15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 ACOX2Q99424 681 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 SLC2A11Q9BYW1 496 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 ELOVL2Q9NXB9 296 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 MUTYHQ9UIF7 546 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 KIAA1549LQ6ZVL6 1849 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 SRCP12931 536 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 TIE1P35590 1138 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 RPL21P46778 160 aaKnown RBP15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 RENBPP51606 427 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 RHOAP61586 193 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 SPARCL1Q14515 664 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 CYTH1Q15438 398 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 CCDC70Q6NSX1 233 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 Q6ZVU0 165 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 PHTF2Q8N3S3 785 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 EZH1Q92800 747 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 ACDQ96AP0 544 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 BRD8Q9H0E9 1235 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 RETREG1Q9H6L5 497 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 PCDH9Q9HC56 1237 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 CACNA2D2Q9NY47 1150 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 FEZ2Q9UHY8 353 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 ERVW-1Q9UQF0 538 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 NEU2Q9Y3R4 380 aa15.66■□□□□ 0.1
PDLIM5-202ENST00000318007 CFAP69A5D8W1 941 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 USP12O75317 370 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 EGFP01133 1207 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 APODP05090 189 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 APRTP07741 180 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 SLC12A1Q13621 1099 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 PTK6Q13882 451 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 HNRNPDQ14103 355 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 PTPRNQ16849 979 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 FNDC3BQ53EP0 1204 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 SLC44A4Q53GD3 710 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 EGFLAMQ63HQ2 1017 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 TEKT5Q96M29 485 aa15.65■□□□□ 0.1
PDLIM5-202ENST00000318007 PWWP2AQ96N64 755 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms