RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 CNOT11Q9UKZ1 510 aaKnown RBP16.56■□□□□ 0.24
CACFD1-202ENST00000316948 PAIP2BQ9ULR5 123 aaKnown RBP16.56■□□□□ 0.24
CACFD1-202ENST00000316948 MCM3APO60318 1980 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 SYNJ2BP-COX16A0A087WUM0 186 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 KCNK1O00180 336 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 GABBR2O75899 941 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 SEC24DO94855 1032 aaPredicted RBP16.56■□□□□ 0.24
CACFD1-202ENST00000316948 STAMBPO95630 424 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 MPOP05164 745 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 EPHX2P34913 555 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 NUP107P57740 925 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 IFRD2Q12894 506 aaPredicted RBP16.56■□□□□ 0.24
CACFD1-202ENST00000316948 DPYSQ14117 519 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 TMEM132DQ14C87 1099 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 SPANXN3Q5MJ09 141 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 LAYNQ6UX15 382 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 DEFB132Q7Z7B7 95 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 FIBCD1Q8N539 461 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACFD1-202ENST00000316948 ASB9Q96DX5 294 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 CLK4Q9HAZ1 481 aaKnown RBP16.56■□□□□ 0.24
CACFD1-202ENST00000316948 COX16Q9P0S2 106 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 CDC14AQ9UNH5 594 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 SCN1AP35498 2009 aa16.56■□□□□ 0.24
CACFD1-202ENST00000316948 C9IYK1 514 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 NFKBIEO00221 500 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 TADA2AO75478 443 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 RPS12P25398 132 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ATICP31939 592 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 MAGEA12P43365 314 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 INCA1Q0VD86 236 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 TRIM25Q14258 630 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 KIZQ2M2Z5 673 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 CELF3Q5SZQ8 465 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 LIPMQ5VYY2 423 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ZBTB49Q6ZSB9 765 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 CLEC14AQ86T13 490 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 FAM131BQ86XD5 332 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 FBXO16Q8IX29 292 aaPredicted RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 TP53INP2Q8IXH6 220 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ZNF786Q8N393 782 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 SPATA6LQ8N4H0 392 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 LPGAT1Q92604 370 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ISOC1Q96CN7 298 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 APOL2Q9BQE5 337 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 PAIP1Q9H074 479 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 CXCL16Q9H2A7 254 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 PDZD7Q9H5P4 517 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ZNF385DQ9H6B1 395 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 PFDN4Q9NQP4 134 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 TMPRSS4Q9NRS4 437 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ADAM28Q9UKQ2 775 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 SQORQ9Y6N5 450 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 PTPRFP10586 1907 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 TTC36A6NLP5 189 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 HTRA2O43464 458 aaPredicted RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 TIPRLO75663 272 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ESRRGP62508 458 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 PRKAA1Q13131 559 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 DGKDQ16760 1214 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 Q3C1V9 767 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ZBTB46Q86UZ6 589 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ZNF567Q8N184 647 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 C12orf43Q96C57 262 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 SPATC1LQ9H0A9 340 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 VRTNQ9H8Y1 702 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 IARS2Q9NSE4 1012 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 DPP3Q9NY33 737 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 PIM2Q9P1W9 311 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 TLK1Q9UKI8 766 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 PCDHGA7Q9Y5G6 932 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 H2AFYO75367 372 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ETFBP38117 255 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 ARL4AP40617 200 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 CD97P48960 835 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 CTBSQ01459 385 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 MPP3Q13368 585 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 FASTKD5Q7L8L6 764 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 C7orf31Q8N865 590 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 SLCO4A1Q96BD0 722 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 OMDQ99983 421 aa16.55■□□□□ 0.24
CACFD1-202ENST00000316948 MRPL45Q9BRJ2 306 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 RUVBL2Q9Y230 463 aaKnown RBP16.55■□□□□ 0.24
CACFD1-202ENST00000316948 HCRTO43612 131 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 GNAO1P09471 354 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 LCP1P13796 627 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 ARF4P18085 180 aaPredicted RBP16.54■□□□□ 0.24
CACFD1-202ENST00000316948 PLPPR4Q7Z2D5 763 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.54■□□□□ 0.24
CACFD1-202ENST00000316948 CNTD1Q8N815 330 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 FAM110BQ8TC76 370 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 KCTD4Q8WVF5 259 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 VPS39Q96JC1 886 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 LRRC40Q9H9A6 602 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 PRMT7Q9NVM4 692 aaPredicted RBP16.54■□□□□ 0.24
CACFD1-202ENST00000316948 TBCCD1Q9NVR7 557 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 VANGL2Q9ULK5 521 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 SAC3D1A6NKF1 404 aa16.54■□□□□ 0.24
CACFD1-202ENST00000316948 PSMD12O00232 456 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms