RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 RBM14Q96PK6 669 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 PLIN2Q99541 437 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 TRIM56Q9BRZ2 755 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 SLA2Q9H6Q3 261 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM134Q9H6X4 195 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 NANOGQ9H9S0 305 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 CPNE5Q9HCH3 593 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 CYP26B1Q9NR63 512 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 CHST12Q9NRB3 414 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 OLAHQ9NV23 265 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ZC3H7BQ9UGR2 993 aaKnown RBP6.76□□□□□ -1.33
ZNF540-201ENST00000316433 PTPN22Q9Y2R2 807 aa6.76□□□□□ -1.33
ZNF540-201ENST00000316433 ARHGEF37A1IGU5 675 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 MEN1O00255 615 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 NCAM2O15394 837 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 SULT1B1O43704 296 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 MFN2O95140 757 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 NDUFB10O96000 172 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 NELFEP18615 380 aaKnown RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CCNA2P20248 432 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 PROZP22891 400 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 ADRA1DP25100 572 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 MAP4P27816 1152 aaKnown RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CSTF2P33240 577 aaKnown RBP eCLIP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CASP3P42574 277 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 GPLD1P80108 840 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 MRPS15P82914 257 aaKnown RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 KRT17Q04695 432 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CDC20Q12834 499 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 TARDBPQ13148 414 aaKnown RBP eCLIP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 NME3Q13232 169 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 PKN2Q16513 984 aaKnown RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 DACT2Q5SW24 774 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RNASEH2BQ5TBB1 312 aaKnown RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 METTL11BQ5VVY1 283 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 SDE2Q6IQ49 451 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CARM1Q86X55 608 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 SIX6OS1Q8N1H7 587 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 FIBCD1Q8N539 461 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CCNYL1Q8N7R7 359 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 ISL2Q96A47 359 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 GPRASP2Q96D09 838 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RMDN3Q96TC7 470 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 TMEM246Q9BRR3 403 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 GON7Q9BXV9 100 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RAD21L1Q9H4I0 556 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 ACSS3Q9H6R3 686 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 KLHL42Q9P2K6 505 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CDH22Q9UJ99 828 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 ZNF229Q9UJW7 825 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 GMEB2Q9UKD1 530 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 HCN4Q9Y3Q4 1203 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 SNCAIPQ9Y6H5 919 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 COL11A1P12107 1806 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 C6orf229H3BNL8 230 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 LIASO43766 372 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 OR7A10O76100 309 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 C1QAP02745 245 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 ICAM1P05362 532 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 ATF2P15336 505 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RPL9P32969 192 aaKnown RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 SCNN1AP37088 669 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RARRES1P49788 294 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 MLLT10P55197 1068 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 IFITM3Q01628 133 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CYP24A1Q07973 514 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 TKFCQ3LXA3 575 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RALGPS1Q5JS13 557 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 PLA2G4FQ68DD2 849 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CDR2LQ86X02 465 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 ARL6IP6Q8N6S5 226 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 FBXL13Q8NEE6 735 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 PIK3R3Q92569 461 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 LPAR1Q92633 364 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 SH3YL1Q96HL8 342 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CCDC106Q9BWC9 280 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 NPLQ9BXD5 320 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 LHX5Q9H2C1 402 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 VRTNQ9H8Y1 702 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 AGO4Q9HCK5 861 aaKnown RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 TAS2R7Q9NYW3 318 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 HSPBP1Q9NZL4 362 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 EMC3Q9P0I2 261 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 PSMC3IPQ9P2W1 217 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RIMS3Q9UJD0 308 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 SLC45A1Q9Y2W3 748 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 TANC1Q9C0D5 1861 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 FRMPD2Q68DX3 1309 aaPredicted RBP6.75□□□□□ -1.33
ZNF540-201ENST00000316433 FAM237BA0A1B0GVD1 139 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 EXOC1LA0A1B0GW35 172 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 H0YJX3 145 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 I3L4J1 428 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 USP12O75317 370 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RFPL2O75678 378 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 ALDH1A2O94788 518 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 PGK2P07205 417 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 RETP07949 1114 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 NCAM1P13591 858 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 CNTFP26441 200 aa6.75□□□□□ -1.33
ZNF540-201ENST00000316433 TRIM23P36406 574 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms