RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ARMC2Q8NEN0 867 aa7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 SPATA17Q96L03 361 aa7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 TCF25Q9BQ70 676 aa7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 FOXP3Q9BZS1 431 aa7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 UBE2OQ9C0C9 1292 aaKnown RBP7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 IL21Q9HBE4 155 aa7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 GLOD4Q9HC38 313 aa7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 IARS2Q9NSE4 1012 aaKnown RBP7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 CLIC5Q9NZA1 410 aa7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 AFF4Q9UHB7 1163 aaKnown RBP7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 IKBKGQ9Y6K9 419 aa7.12□□□□□ -1.27
LYSMD3-201ENST00000315948 BRWD1Q9NSI6 2320 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 ABHD14A-ACY1A0A1B0GW23 586 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 FAM159BA6NKW6 160 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 MATN3O15232 486 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 RTN3O95197 1032 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 VAPBO95292 243 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 MBL2P11226 248 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 MX2P20592 715 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 BGNP21810 368 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 ARSDP51689 593 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 AIF1P55008 147 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 ELAVL2Q12926 359 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 HECTD3Q5T447 861 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 IL31Q6EBC2 164 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 SLC26A11Q86WA9 606 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 ANKLE1Q8NAG6 615 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 PRR11Q96HE9 360 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 SRPK1Q96SB4 655 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CORO1BQ9BR76 489 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 APOL5Q9BWW9 433 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CATSPERBQ9H7T0 1116 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 MARCOQ9UEW3 520 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 DNMT3LQ9UJW3 386 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 MTO1Q9Y2Z2 717 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CPQQ9Y646 472 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 FAM169AQ9Y6X4 670 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 PLXNA3P51805 1871 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 LPXNO60711 386 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 RAMP2O60895 175 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CXCL14O95715 111 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 PDHA1P08559 390 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 HOXD9P28356 352 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 FDFT1P37268 417 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 WNT3AP56704 352 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 RPL10AP62906 217 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 GLIPR1L2Q4G1C9 344 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 ANKRD20A4Q4UJ75 823 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 C1orf53Q5VUE5 145 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 BZW1Q7L1Q6 419 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 TDRPQ86YL5 185 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 NDUFAF2Q8N183 169 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CKAP2Q8WWK9 683 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 IL12RB2Q99665 862 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 SP110Q9HB58 689 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 XAB2Q9HCS7 855 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CASS4Q9NQ75 786 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 MRPL17Q9NRX2 175 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 C20orf96Q9NUD7 363 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 UXTQ9UBK9 157 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 DCTN4Q9UJW0 460 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 A8MX80 341 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 PHGDHO43175 533 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CCR10P46092 362 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 SLC5A9Q2M3M2 681 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 KLHL38Q2WGJ6 581 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 TMEM240Q5SV17 173 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 SMYD5Q6GMV2 418 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 PACS1Q6VY07 963 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 C12orf76Q8N812 135 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CCDC63Q8NA47 563 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 MICAL1Q8TDZ2 1067 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 ING5Q8WYH8 240 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 NDNQ99608 321 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 SEMA3CQ99985 751 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 TTLL2Q9BWV7 592 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 OXCT2Q9BYC2 517 aaPredicted RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 CNOT10Q9H9A5 744 aaKnown RBP7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 NKIRAS1Q9NYS0 192 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 SLC24A2Q9UI40 661 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 TRIM33Q9UPN9 1127 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 ARL5AQ9Y689 179 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 NOTCH4Q99466 2003 aa7.11□□□□□ -1.27
LYSMD3-201ENST00000315948 IGLV3-10A0A075B6K4 115 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 KIAA0355O15063 1070 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ACSL4O60488 711 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 GREM1O60565 184 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 LILRB3O75022 631 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 OAS1P00973 400 aaKnown RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 MYL4P12829 197 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 KCNA4P22459 653 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CCNCP24863 283 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ARRB2P32121 409 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 PBX2P40425 430 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 LIG3P49916 1009 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 ATXN7L2Q5T6C5 722 aaPredicted RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 STRA8Q7Z7C7 330 aa7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CCDC97Q96F63 343 aaPredicted RBP7.1□□□□□ -1.27
LYSMD3-201ENST00000315948 CERS2Q96G23 380 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms