RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ACTL7BQ9Y614 415 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 ABLIM1O14639 778 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 SLC9A3R1O14745 358 aaPredicted RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 FOXN1O15353 648 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 AVILO75366 819 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 PRKAR2AP13861 404 aaKnown RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 CDH4P55283 916 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 SYT12Q8IV01 421 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 RDH11Q8TC12 318 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 NAALADL1Q9UQQ1 740 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 ALKQ9UM73 1620 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 SRRM3A6NNA2 597 aaPredicted RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 GATBO75879 557 aaKnown RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 ZNF470Q6ECI4 717 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 TMC3Q7Z5M5 1100 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 PTAR1Q7Z6K3 402 aaPredicted RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 ACOT1Q86TX2 421 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 COLGALT2Q8IYK4 626 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 CAPSLQ8WWF8 208 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 FAM84BQ96KN1 310 aaPredicted RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 MARK2Q7KZI7 788 aaKnown RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 MEIOBQ8N635 442 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 ACMSDQ8TDX5 336 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 FAM129BQ96TA1 746 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 MARK1Q9P0L2 795 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 SERPINA4P29622 427 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 PDX1P52945 283 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 TBX4P57082 545 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 FBXO47Q5MNV8 452 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 OFCC1Q8IZS5 231 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 POLD4Q9HCU8 107 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 RBM22Q9NW64 420 aaKnown RBP eCLIP15.67■□□□□ 0.13e-9■■■□□ 18.9
HCFC1-201ENST00000310441 ARL15Q9NXU5 204 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 GIT1Q9Y2X7 761 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 MYO3AQ8NEV4 1616 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 FOXN3O00409 490 aaPredicted RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 FCHO1O14526 889 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 LRIG2O94898 1065 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 FGFR1P11362 822 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 HKDC1Q2TB90 917 aa15.67■□□□□ 0.1
HCFC1-201ENST00000310441 NKAPQ8N5F7 415 aaKnown RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 PTCD2Q8WV60 388 aaKnown RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 ARID1BQ8NFD5 2236 aaPredicted RBP15.67■□□□□ 0.1
HCFC1-201ENST00000310441 RASSF5Q8WWW0 418 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 LENG1Q96BZ8 264 aaPredicted RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 CISHQ9NSE2 258 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 CAMTA2O94983 1202 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 PGK1P00558 417 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 PAEPP09466 180 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 GCLCP48506 637 aaPredicted RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 TYSND1Q2T9J0 566 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 PPP3R2Q96LZ3 170 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 CBWD1Q9BRT8 395 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 MRPL9Q9BYD2 267 aaKnown RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 DMGDHQ9UI17 866 aaKnown RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 LEF1Q9UJU2 399 aaPredicted RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 TDRKHQ9Y2W6 561 aaKnown RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 GSTT1P30711 240 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 RIPPLY1Q0D2K3 151 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 GPR101Q96P66 508 aaPredicted RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 MCIDASD6RGH6 385 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 IGKV5-2P06315 115 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 AXLP30530 894 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 REXO1L1PQ8IX06 675 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 SLC9A6Q92581 669 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 CCDC28BQ9BUN5 200 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 EPB41L1Q9H4G0 881 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 ELP3Q9H9T3 547 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 UPB1Q9UBR1 384 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 VIL1P09327 827 aaKnown RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 ATN1P54259 1190 aaPredicted RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 HYIQ5T013 277 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 TXNDC11Q6PKC3 985 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 PHC3Q8NDX5 983 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 MRPL57Q9BQC6 102 aaKnown RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 IDH2P48735 452 aaKnown RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 PTPN11Q06124 597 aaPredicted RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 RBBP4Q09028 425 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 CBWD6Q4V339 395 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 AKIRIN2Q53H80 203 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 MTF2Q9Y483 593 aaPredicted RBP15.66■□□□□ 0.1
HCFC1-201ENST00000310441 GMPPBQ9Y5P6 360 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 A0A096LPK6 155 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 FSBPO95073 299 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 JCHAINP01591 159 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 DPYSQ14117 519 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 CRY1Q16526 586 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 Q4G0T1 1027 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 RNF44Q7L0R7 432 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 GRIP2Q9C0E4 1043 aa15.66■□□□□ 0.1
HCFC1-201ENST00000310441 PLOD3O60568 738 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 TNFRSF8P28908 595 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 SDC2P34741 201 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 BOP1Q14137 746 aaKnown RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 TCP10LQ8TDR4 215 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 H2AFXP16104 143 aaPredicted RBP15.65■□□□□ 0.1
HCFC1-201ENST00000310441 ERCC2P18074 760 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 CRATP43155 626 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 KLK7P49862 253 aa15.65■□□□□ 0.1
HCFC1-201ENST00000310441 GLRA4Q5JXX5 417 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms