RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SAPCD2Q86UD0 394 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 CATSPER1Q8NEC5 780 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 SDCCAG3Q96C92 435 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 MCRS1Q96EZ8 462 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 ELMO2Q96JJ3 720 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 FSD1LQ9BXM9 530 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 DRC3Q9H069 523 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 LMCD1Q9NZU5 365 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 TMEM216Q9P0N5 145 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 EGFL7Q9UHF1 273 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 ABT1Q9ULW3 272 aaKnown RBP12.86□□□□□ -0.35
RETREG3-201ENST00000309428 IPPQ9Y573 584 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 NME7Q9Y5B8 376 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 SCN1AP35498 2009 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 E2F6O75461 281 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 HNRNPLP14866 589 aaKnown RBP eCLIP12.86□□□□□ -0.35
RETREG3-201ENST00000309428 ABCE1P61221 599 aaKnown RBP12.86□□□□□ -0.35
RETREG3-201ENST00000309428 NSUN2Q08J23 767 aaKnown RBP eCLIP12.86□□□□□ -0.35
RETREG3-201ENST00000309428 SNX17Q15036 470 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 TBCCQ15814 346 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 CAND1Q86VP6 1230 aaKnown RBP12.86□□□□□ -0.35
RETREG3-201ENST00000309428 ZNF781Q8N8C0 355 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 PCDHAC1Q9H158 963 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 PIGVQ9NUD9 493 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 GJD2Q9UKL4 321 aa12.86□□□□□ -0.35
RETREG3-201ENST00000309428 RPL26L1Q9UNX3 145 aaKnown RBP12.86□□□□□ -0.35
RETREG3-201ENST00000309428 NT5C1B-RDH14C9J2C7 533 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 BOLA2-SMG1P6H3BVE0 249 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 VAPBO95292 243 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 IRF9Q00978 393 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 KLF10Q13118 480 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 KLHDC10Q6PID8 442 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 ANKRD23Q86SG2 305 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 TDRPQ86YL5 185 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 CLEC4FQ8N1N0 589 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 SLCO2A1Q92959 643 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 MAML3Q96JK9 1138 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 CYP2S1Q96SQ9 504 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 SPON2Q9BUD6 331 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 KLHL25Q9H0H3 589 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 CYP3A43Q9HB55 503 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 TRDMT1O14717 391 aaKnown RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 SUPT7LO94864 414 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 PFKMP08237 780 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 CKMT2P17540 419 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 PTPN1P18031 435 aaKnown RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 XRCC1P18887 633 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 NFKB1P19838 968 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 EDNRBP24530 442 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 CHRNA4P43681 627 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 PPIL2Q13356 520 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 GPRIN1Q7Z2K8 1008 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 HEATR4Q86WZ0 1026 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 ATP6V1E2Q96A05 226 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 PBXIP1Q96AQ6 731 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 PTCD3Q96EY7 689 aaKnown RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 CCDC97Q96F63 343 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 LHX5Q9H2C1 402 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 NOL11Q9H8H0 719 aaKnown RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 GBA2Q9HCG7 927 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 SELENONQ9NZV5 590 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 DCDC2Q9UHG0 476 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 DOCK3Q8IZD9 2030 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 F8W8V4 182 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 GAS2O43903 313 aaKnown RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 TRIM13O60858 407 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 TIPRLO75663 272 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 OCM2P0CE71 109 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 OCMP0CE72 109 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 ZNF23P17027 643 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 HOXA11P31270 313 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 LILRA4P59901 499 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 LSM3P62310 102 aaKnown RBP12.85□□□□□ -0.35
RETREG3-201ENST00000309428 OCA2Q04671 838 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 SKA1Q96BD8 255 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 KLHL5Q96PQ7 755 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 VPS33BQ9H267 617 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 USP29Q9HBJ7 922 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
RETREG3-201ENST00000309428 LINC00854A0A1B0GVQ3 168 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 SYCE1LA8MT33 242 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 ZBTB24O43167 697 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-201ENST00000309428 IL10P22301 178 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 GRK2P25098 689 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 CD52P31358 61 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 L1CAMP32004 1257 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 GRIA3P42263 894 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 ARHGAP36Q6ZRI8 547 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 DDI1Q8WTU0 396 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 ZNF560Q96MR9 790 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 TMEM209Q96SK2 561 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 ABHD16BQ9H3Z7 469 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 FARP1Q9Y4F1 1045 aaPredicted RBP12.84□□□□□ -0.35
RETREG3-201ENST00000309428 NR5A2O00482 541 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 MAGP20916 626 aa12.84□□□□□ -0.35
RETREG3-201ENST00000309428 IL4RP24394 825 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms