RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SDCBP2Q9H190 292 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 RPF2Q9H7B2 306 aaKnown RBP16.49■□□□□ 0.23
CCDC8-201ENST00000307522 ATAD3AQ9NVI7 634 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 TMEM216Q9P0N5 145 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 SPO11Q9Y5K1 396 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 TMEM191CA6NGB0 347 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 EIF3FO00303 357 aaPredicted RBP16.49■□□□□ 0.23
CCDC8-201ENST00000307522 HOXC6P09630 235 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 PABPC1P11940 636 aaKnown RBP16.49■□□□□ 0.23
CCDC8-201ENST00000307522 NCAM1P13591 858 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 PCYT1AP49585 367 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 MBTD1Q05BQ5 628 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 PTP4A2Q12974 167 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 IKBKEQ14164 716 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 PCLAFQ15004 111 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 CST9Q5W186 159 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 BORAQ6PGQ7 559 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 NAPRTQ6XQN6 538 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 VASH1Q7L8A9 365 aaPredicted RBP16.49■□□□□ 0.23
CCDC8-201ENST00000307522 TICAM1Q8IUC6 712 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 PARP8Q8N3A8 854 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 EIF2AQ9BY44 585 aaKnown RBP16.49■□□□□ 0.23
CCDC8-201ENST00000307522 SLC2A11Q9BYW1 496 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 EHD1Q9H4M9 534 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 MROH8Q9H579 483 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 SNTG2Q9NY99 539 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 HESX1Q9UBX0 185 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 SBF1O95248 1867 aa16.49■□□□□ 0.23
CCDC8-201ENST00000307522 ADGRA2Q96PE1 1338 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 HSPA4LO95757 839 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 JUNP05412 331 aaKnown RBP16.48■□□□□ 0.23
CCDC8-201ENST00000307522 MZF1P28698 734 aaPredicted RBP16.48■□□□□ 0.23
CCDC8-201ENST00000307522 C15orf39Q6ZRI6 1047 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 ABRAQ8N0Z2 381 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 TMEM102Q8N9M5 508 aaPredicted RBP16.48■□□□□ 0.23
CCDC8-201ENST00000307522 KYQ8NBH2 561 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 ADCY4Q8NFM4 1077 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 DNAJB3Q8WWF6 145 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 MTG1Q9BT17 334 aaPredicted RBP16.48■□□□□ 0.23
CCDC8-201ENST00000307522 GPATCH2LQ9NWQ4 482 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 NCKIPSDQ9NZQ3 722 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 AP4E1Q9UPM8 1137 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 PSMD11O00231 422 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 BIRC5O15392 142 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 KRT38O76015 456 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 MYL3P08590 195 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 ART3Q13508 389 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 RGS21Q2M5E4 152 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 MPZL3Q6UWV2 235 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 DSG4Q86SJ6 1040 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 BRSK2Q8IWQ3 736 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 C1orf127Q8N9H9 656 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 SCAIQ8N9R8 606 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 CYGBQ8WWM9 190 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 FBXL20Q96IG2 436 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 BIRC8Q96P09 236 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 APBA2Q99767 749 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 OSBPL11Q9BXB4 747 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 GBA3Q9H227 469 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 MARCH7Q9H992 704 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 WDR41Q9HAD4 459 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 ZNHIT2Q9UHR6 403 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 GIT1Q9Y2X7 761 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 UNC80Q8N2C7 3258 aa16.48■□□□□ 0.23
CCDC8-201ENST00000307522 CNOT3O75175 753 aaKnown RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 TFE3P19532 575 aaPredicted RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 MPSTP25325 297 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 TKTP29401 623 aaKnown RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 PLCL1Q15111 1095 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 MAMDC4Q6UXC1 1216 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 PIWIL3Q7Z3Z3 882 aaKnown RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 ARFGAP1Q8N6T3 406 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 C2orf69Q8N8R5 385 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 PSD4Q8NDX1 1056 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 HEXIM2Q96MH2 286 aaKnown RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 DDX56Q9NY93 547 aaKnown RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CROTQ9UKG9 612 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 PARP14Q460N5 1801 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 WDR81Q562E7 1941 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CFAP99D6REC4 459 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 SOCS2O14508 198 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 HBP1O60381 514 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 C1QAP02745 245 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 SPIDRQ14159 915 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 MXD4Q14582 209 aaPredicted RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 GRIK4Q16099 956 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 ZNF829Q3KNS6 432 aaPredicted RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 FAM47CQ5HY64 1035 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CAPSLQ8WWF8 208 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 PIWIL1Q96J94 861 aaKnown RBP16.47■□□□□ 0.23
CCDC8-201ENST00000307522 SPATA17Q96L03 361 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 NSMCE3Q96MG7 304 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 SLC39A3Q9BRY0 314 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CEP41Q9BYV8 373 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 POPDC2Q9HBU9 364 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 CYTH4Q9UIA0 394 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 SIX4Q9UIU6 781 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 IQCA1LA6NCM1 817 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 MT-CO1P00395 513 aa16.47■□□□□ 0.23
CCDC8-201ENST00000307522 TNNC2P02585 160 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms