RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 C7orf26Q96N11 449 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 ZIC5Q96T25 663 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 PCYT2Q99447 389 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 Q9Y3F1 56 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 PCDHA11Q9Y5I1 949 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 NR5A2O00482 541 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 ARPP19P56211 112 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 GRM3Q14832 879 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 IL23RQ5VWK5 629 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 KLHDC10Q6PID8 442 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 GABPB2Q8TAK5 448 aaPredicted RBP14.82□□□□□ -0.04
PTPN9-201ENST00000306726 ESAMQ96AP7 390 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 DCDC2Q9UHG0 476 aa14.82□□□□□ -0.04
PTPN9-201ENST00000306726 LCTP09848 1927 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 KNL1Q8NG31 2342 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 ACKR2O00590 384 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 FAM58BPP0C7Q3 252 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 NFKB1P19838 968 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 CRHR1P34998 444 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 GP5P40197 560 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 STT3AP46977 705 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 MAXP61244 160 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 MSLNQ13421 630 aaPredicted RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 SLC10A6Q3KNW5 377 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 C16orf87Q6PH81 154 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 ARHGAP18Q8N392 663 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 TRAPPC9Q96Q05 1148 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 SIKE1Q9BRV8 207 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 FBRSL1Q9HCM7 1045 aaKnown RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 RBMX2Q9Y388 322 aaKnown RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 CNTRLQ7Z7A1 2325 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 UBA6A0AVT1 1052 aaPredicted RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 TRAFD1O14545 582 aaPredicted RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 CILPO75339 1184 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 INHBCP55103 352 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 WASHC5Q12768 1159 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 SYPL2Q5VXT5 272 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 FAM47BQ8NA70 645 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 NXNL1Q96CM4 212 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 RHOBTB2Q9BYZ6 727 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 PPCSQ9HAB8 311 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 GJD2Q9UKL4 321 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 C9IYK1 514 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 ZBTB24O43167 697 aaPredicted RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 USP17L7P0C7H9 530 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 MCF2P10911 925 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 NMBRP28336 390 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 CHRNA4P43681 627 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 GJA9P57773 515 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 PHEXP78562 749 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 LAMC2Q13753 1193 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 TWF2Q6IBS0 349 aaKnown RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 HFE2Q6ZVN8 426 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 TFAP2DQ7Z6R9 452 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 PDSS2Q86YH6 399 aa14.81□□□□□ -0.04
PTPN9-201ENST00000306726 FCRL3Q96P31 734 aaPredicted RBP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.81□□□□□ -0.04
PTPN9-201ENST00000306726 TFEBP19484 476 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 GABRB2P47870 512 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 SURF1Q15526 300 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 PPP1R3AQ16821 1122 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 MBLAC2Q68D91 279 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 DRICH1Q6PGQ1 229 aaPredicted RBP14.8□□□□□ -0.04
PTPN9-201ENST00000306726 METTL7BQ6UX53 244 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ZNF567Q8N184 647 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 PXYLP1Q8TE99 480 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 PDCD6IPQ8WUM4 868 aaKnown RBP14.8□□□□□ -0.04
PTPN9-201ENST00000306726 VPS39Q96JC1 886 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ARMC7Q9H6L4 198 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 COQ10BQ9H8M1 238 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 PFDN4Q9NQP4 134 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 SRRDQ9UH36 339 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ZDHHC2Q9UIJ5 367 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ZBTB11O95625 1053 aaPredicted RBP14.8□□□□□ -0.04
PTPN9-201ENST00000306726 THRAP10827 490 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 LSM3P62310 102 aaKnown RBP14.8□□□□□ -0.04
PTPN9-201ENST00000306726 TCEAL1Q15170 157 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 TTC33Q6PID6 262 aaPredicted RBP14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ATG14Q6ZNE5 492 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 MAVSQ7Z434 540 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 RNF139Q8WU17 664 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 NXF3Q9H4D5 531 aaKnown RBP14.8□□□□□ -0.04
PTPN9-201ENST00000306726 UBAP1Q9NZ09 502 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 PTGDR2Q9Y5Y4 395 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ZNFX1Q9P2E3 1918 aaKnown RBP14.8□□□□□ -0.04
PTPN9-201ENST00000306726 NRP1O14786 923 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 TGDSO95455 350 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ME2P23368 584 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 FAM83EQ2M2I3 478 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ZNF470Q6ECI4 717 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 PIGZQ86VD9 579 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 LENG1Q96BZ8 264 aaPredicted RBP14.8□□□□□ -0.04
PTPN9-201ENST00000306726 SIRPGQ9P1W8 387 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 ASB3Q9Y575 518 aa14.8□□□□□ -0.04
PTPN9-201ENST00000306726 HUS1O60921 280 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 BAIAP3O94812 1187 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 STBD1O95210 358 aa14.79□□□□□ -0.04
PTPN9-201ENST00000306726 PCSK6P29122 969 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms