RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 NEK3P51956 506 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 AIF1P55008 147 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 FBXL19Q6PCT2 694 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 ZBTB10Q96DT7 871 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 FBXO6Q9NRD1 293 aaPredicted RBP16.14■□□□□ 0.17
USP42-201ENST00000306177 RAD18Q9NS91 495 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 PLIN4Q96Q06 1357 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 SMIM35A0A1B0GVV1 85 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 SNX3O60493 162 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 B4GALT4O60513 344 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 SMNDC1O75940 238 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■■■□ 23.6
USP42-201ENST00000306177 MTA2O94776 668 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 BMP10O95393 424 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 PROCP04070 461 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 RXRGP48443 463 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 IL5RAQ01344 420 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 PFKFB4Q16877 469 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 AFTPHQ6ULP2 937 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 FAM35AQ86V20 835 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 ZNF513Q8N8E2 541 aaPredicted RBP16.14■□□□□ 0.17
USP42-201ENST00000306177 RSPH1Q8WYR4 309 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 ACSS3Q9H6R3 686 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 PDE5AO76074 875 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 PSMA3P25788 255 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 NCF4Q15080 339 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 RNF148Q8N7C7 305 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 PPP1R16AQ96I34 528 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 KREMEN1Q96MU8 473 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 MRPL45Q9BRJ2 306 aaKnown RBP16.14■□□□□ 0.17
USP42-201ENST00000306177 FAM105AQ9NUU6 356 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 GNPTGQ9UJJ9 305 aa16.14■□□□□ 0.17
USP42-201ENST00000306177 PSMD12O00232 456 aaPredicted RBP16.13■□□□□ 0.17
USP42-201ENST00000306177 PRKAR2AP13861 404 aaKnown RBP16.13■□□□□ 0.17
USP42-201ENST00000306177 LBPP18428 481 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 HDCP19113 662 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ATP5F1P24539 256 aaPredicted RBP16.13■□□□□ 0.17
USP42-201ENST00000306177 S100A3P33764 101 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 XRCC4Q13426 336 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 CYP2A13Q16696 494 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 FAM110CQ1W6H9 321 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 C9orf57Q5W0N0 161 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ZCCHC8Q6NZY4 707 aaKnown RBP16.13■□□□□ 0.17
USP42-201ENST00000306177 CHMP1BQ7LBR1 199 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 MAGEC3Q8TD91 643 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 SUSD6Q92537 303 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 MAGED4Q96JG8 741 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ARMC7Q9H6L4 198 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 LIMD1Q9UGP4 676 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 REXO2Q9Y3B8 237 aaKnown RBP16.13■□□□□ 0.17
USP42-201ENST00000306177 IGKV6D-41A0A0C4DH26 115 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 TMEM191CA6NGB0 347 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 RGS5O15539 181 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 CATP04040 527 aaKnown RBP16.13■□□□□ 0.17
USP42-201ENST00000306177 HPCAL1P37235 193 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 NAGLUP54802 743 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 USP41Q3LFD5 358 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 RD3Q7Z3Z2 195 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ACTRT2Q8TDY3 377 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 LGMNQ99538 433 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ASB8Q9H765 288 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ZNF446Q9NWS9 450 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 CAB39Q9Y376 341 aaPredicted RBP16.13■□□□□ 0.17
USP42-201ENST00000306177 ANXA5P08758 320 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 MYBL2P10244 700 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 TTPAP49638 278 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ACSM2AQ08AH3 577 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ACSM2BQ68CK6 577 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 FAM228AQ86W67 206 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 DENND1CQ8IV53 801 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 DDHD1Q8NEL9 900 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 MAF1Q9H063 256 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 RNPEPQ9H4A4 650 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ADPRHL2Q9NX46 363 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 KLHL20Q9Y2M5 609 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 AP3M1Q9Y2T2 418 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 NID2Q14112 1375 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 CLDN5O00501 218 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 NAA20P61599 178 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 PAGE2BQ5JRK9 111 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 ATAD3BQ5T9A4 648 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 DNAJC14Q6Y2X3 702 aaPredicted RBP16.13■□□□□ 0.17
USP42-201ENST00000306177 ARCQ7LC44 396 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 MTMR14Q8NCE2 650 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 WDR48Q8TAF3 677 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 RNF145Q96MT1 663 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 SEMA3CQ99985 751 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 C1QTNF7Q9BXJ2 289 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 MAN1C1Q9NR34 630 aa16.13■□□□□ 0.17
USP42-201ENST00000306177 LOC102724159A0A0B4J2E5 919 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 RNF225M0QZC1 329 aaPredicted RBP16.12■□□□□ 0.17
USP42-201ENST00000306177 PWP2Q15269 919 aaKnown RBP16.12■□□□□ 0.17
USP42-201ENST00000306177 OTUD3Q5T2D3 398 aaPredicted RBP16.12■□□□□ 0.17
USP42-201ENST00000306177 SYT12Q8IV01 421 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 NXF3Q9H4D5 531 aaKnown RBP16.12■□□□□ 0.17
USP42-201ENST00000306177 NCKAP1Q9Y2A7 1128 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 BANF1O75531 89 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 USP2O75604 605 aaPredicted RBP16.12■□□□□ 0.17
USP42-201ENST00000306177 DOK6Q6PKX4 331 aa16.12■□□□□ 0.17
USP42-201ENST00000306177 CYP2R1Q6VVX0 501 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms