RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 FYB2Q5VWT5 728 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 AFMIDQ63HM1 303 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 RNF43Q68DV7 783 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 RNF135Q8IUD6 432 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 CCNJLQ8IV13 435 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 SPATA6LQ8N4H0 392 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 LZTR1Q8N653 840 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 APBB2Q92870 758 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 E2F7Q96AV8 911 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 C1orf74Q96LT6 269 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 FCRL5Q96RD9 977 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 CLSTN3Q9BQT9 956 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 NAT9Q9BTE0 207 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 MRPL9Q9BYD2 267 aaKnown RBP11.57□□□□□ -0.56
SCG2-201ENST00000305409 IL22Q9GZX6 179 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 CWH43Q9H720 699 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 SP110Q9HB58 689 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 CYP4F11Q9HBI6 524 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 SMPD4Q9NXE4 827 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 H7C4K7 107 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 CLGNO14967 610 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 BUD23O43709 281 aaKnown RBP11.57□□□□□ -0.56
SCG2-201ENST00000305409 ITM2AO43736 263 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 TSPAN3O60637 253 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 GSRP00390 522 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 SLC2A3P11169 496 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 WNT3AP56704 352 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 RPS24P62847 133 aaKnown RBP11.57□□□□□ -0.56
SCG2-201ENST00000305409 BNIP1Q12981 228 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 USP41Q3LFD5 358 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 FASTKD1Q53R41 847 aaKnown RBP11.57□□□□□ -0.56
SCG2-201ENST00000305409 CYS1Q717R9 158 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 DENND1CQ8IV53 801 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 BHMTQ93088 406 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 IGSF21Q96ID5 467 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 LRRC37BQ96QE4 947 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 KCNK13Q9HB14 408 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 TMEM39AQ9NV64 488 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 CLIC5Q9NZA1 410 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 HAO1Q9UJM8 370 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 SLC39A10Q9ULF5 831 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 SOX13Q9UN79 622 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 AAR2Q9Y312 384 aaKnown RBP11.57□□□□□ -0.56
SCG2-201ENST00000305409 USH1CQ9Y6N9 552 aa11.57□□□□□ -0.56
SCG2-201ENST00000305409 CHD7Q9P2D1 2997 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 ERI2A8K979 691 aaKnown RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 PHGDHO43175 533 aaKnown RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 HOXA2O43364 376 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 RHOQP17081 205 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 GABRB3P28472 473 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 NPY2RP49146 381 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 ELAVL2Q12926 359 aaKnown RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 MPP3Q13368 585 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 PLD1Q13393 1074 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 POLD3Q15054 466 aaPredicted RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 TAF1BQ53T94 588 aaPredicted RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 ATG14Q6ZNE5 492 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 TTC7BQ86TV6 843 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 ARID3BQ8IVW6 561 aaPredicted RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 CNPY4Q8N129 248 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 PGBD5Q8N414 524 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 OR7D4Q8NG98 312 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 PPP1R14CQ8TAE6 165 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 CYP2S1Q96SQ9 504 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 RBBP8Q99708 897 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 CPNE1Q99829 537 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 STK38LQ9Y2H1 464 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 PRRC2BQ5JSZ5 2229 aaKnown RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 NYNRINQ9P2P1 1898 aaKnown RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 C2orf78A6NCI8 922 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 AURKAO14965 403 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 MUSKO15146 869 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 CACNG3O60359 315 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 RAMP2O60895 175 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 CXCL10P02778 98 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 BPGMP07738 259 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 PIRTP0C851 137 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 TROVE2P10155 538 aaKnown RBP eCLIP11.56□□□□□ -0.56
SCG2-201ENST00000305409 MYL2P10916 166 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 GLDCP23378 1020 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 SGSHP51688 502 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 PRMT2P55345 433 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 IKBKEQ14164 716 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 PTPRCAPQ14761 206 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 GRM3Q14832 879 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 MARC1Q5VT66 337 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 TIFABQ6ZNK6 161 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 C16orf59Q7L2K0 433 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 C10orf107Q8IVU9 208 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 UMODL1-AS1Q8N2C9 162 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 TMEM175Q9BSA9 504 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 SPON2Q9BUD6 331 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 TMEM120AQ9BXJ8 343 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 TRIM55Q9BYV6 548 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 RNF38Q9H0F5 515 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 TMEM248Q9NWD8 314 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 CPSF2Q9P2I0 782 aaKnown RBP11.56□□□□□ -0.56
SCG2-201ENST00000305409 HEY2Q9UBP5 337 aa11.56□□□□□ -0.56
SCG2-201ENST00000305409 COL4A4P53420 1690 aaPredicted RBP11.55□□□□□ -0.56
SCG2-201ENST00000305409 A8MUI8 341 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms