RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 PALMDQ9NP74 551 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 SLC45A1Q9Y2W3 748 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 SMIM31A0A1B0GVY4 71 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 APOC4-APOC2K7ER74 178 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
VAT1L-201ENST00000302536 APOC2P02655 101 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 LPIN1Q14693 890 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 N4BP2L1Q5TBK1 243 aaPredicted RBP13.06□□□□□ -0.32
VAT1L-201ENST00000302536 HEATR6Q6AI08 1181 aaKnown RBP13.06□□□□□ -0.32
VAT1L-201ENST00000302536 IGDCC3Q8IVU1 814 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 UNC5BQ8IZJ1 945 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 MYO1HQ8N1T3 1032 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 CASP10Q92851 521 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 SPATA17Q96L03 361 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 HAUS8Q9BT25 410 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 WDR55Q9H6Y2 383 aaPredicted RBP13.06□□□□□ -0.32
VAT1L-201ENST00000302536 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 CYP4F12Q9HCS2 524 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 TRNAU1APQ9NX07 287 aaKnown RBP13.06□□□□□ -0.32
VAT1L-201ENST00000302536 RRN3Q9NYV6 651 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 GRIK1P39086 918 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 YWHAZP63104 245 aaKnown RBP13.06□□□□□ -0.32
VAT1L-201ENST00000302536 INCA1Q0VD86 236 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 SREBF2Q12772 1141 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 KIAA0319Q5VV43 1072 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 PID1Q7Z2X4 250 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 HCSTQ9UBK5 93 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 AP4B1Q9Y6B7 739 aa13.06□□□□□ -0.32
VAT1L-201ENST00000302536 CDK4P11802 303 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 PCSK6P29122 969 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 CDH5P33151 784 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 TMEM53Q6P2H8 277 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 CCDC80Q76M96 950 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 ZFP28Q8NHY6 868 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 GTF2IRD1Q9UHL9 959 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 MBLAC1A4D2B0 266 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 C3orf70A6NLC5 250 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 MSI1O43347 362 aaKnown RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 MT-ND1P03886 318 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 ZNF24P17028 368 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 ENTPD1P49961 510 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 LSM3P62310 102 aaKnown RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 DAB2P98082 770 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 GK3PQ14409 553 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 BOLA3Q53S33 107 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 LRRC38Q5VT99 294 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 TAF2Q6P1X5 1199 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 AGMOQ6ZNB7 445 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 SYDE1Q6ZW31 735 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 SPATA6LQ8N4H0 392 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 SLC35B2Q8TB61 432 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 CMTM5Q96DZ9 223 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 SERAC1Q96JX3 654 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 KCTD15Q96SI1 283 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 CRTAC1Q9NQ79 661 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 TRIM17Q9Y577 477 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 TTC3P53804 2025 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 FAM58BPP0C7Q3 252 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 PABPC4LP0CB38 370 aaKnown RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 OCM2P0CE71 109 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 OCMP0CE72 109 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 RXRGP48443 463 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 ENPEPQ07075 957 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 TRIM16LQ309B1 348 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 RNASEH2BQ5TBB1 312 aaKnown RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 RHBDF2Q6PJF5 856 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 LRRC52Q8N7C0 313 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 BHLHE22Q8NFJ8 381 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 FAM193BQ96PV7 902 aaPredicted RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 DDX28Q9NUL7 540 aaKnown RBP13.05□□□□□ -0.32
VAT1L-201ENST00000302536 PTTG2Q9NZH5 202 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
VAT1L-201ENST00000302536 NPR3P17342 541 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 GATMP50440 423 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
VAT1L-201ENST00000302536 MORF4L2Q15014 288 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 FSCBQ5H9T9 825 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 TMCO5AQ8N6Q1 288 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 NRDE2Q9H7Z3 1164 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 TMEM30AQ9NV96 361 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
VAT1L-201ENST00000302536 HSFX1Q9UBD0 423 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 C9JVG2 144 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 PIRO00625 290 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 EPHA3P29320 983 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 SNX16P57768 344 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 SLC10A2Q12908 348 aaPredicted RBP13.04□□□□□ -0.32
VAT1L-201ENST00000302536 TRAF2Q12933 501 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 ITGA7Q13683 1181 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 OTUD3Q5T2D3 398 aaPredicted RBP13.04□□□□□ -0.32
VAT1L-201ENST00000302536 TMEM214Q6NUQ4 689 aaKnown RBP13.04□□□□□ -0.32
VAT1L-201ENST00000302536 SLC7A5P1Q8MH63 180 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 ALKBH8Q96BT7 664 aaKnown RBP13.04□□□□□ -0.32
VAT1L-201ENST00000302536 DRC3Q9H069 523 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 KIAA1257Q9ULG3 409 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 TCRBV9S1A1TA0A576 114 aa13.04□□□□□ -0.32
VAT1L-201ENST00000302536 DFFAO00273 331 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms