RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 HLA-DQA2P01906 255 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 CYP2A7P20853 494 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 MTX3Q5HYI7 312 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 ZNF280DQ6N043 979 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 GALNT18Q6P9A2 607 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 C16orf86Q6ZW13 317 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 CLHC1Q8NHS4 586 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 ATXN3LQ9H3M9 355 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 SPHKAPQ2M3C7 1700 aa15.04■□□□□ -0
SCN3B-201ENST00000299333 SMCO3A2RU48 225 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 GH1P01241 217 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 CYP1A1P04798 512 aaPredicted RBP15.03■□□□□ -0
SCN3B-201ENST00000299333 TCF4P15884 667 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 MYL6P60660 151 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 PDK4Q16654 411 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 RFX4Q33E94 735 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 RNASE12Q5GAN4 147 aaKnown RBP15.03■□□□□ -0
SCN3B-201ENST00000299333 GCNT7Q6ZNI0 430 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 DAGLBQ8NCG7 672 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 RCN3Q96D15 328 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 TMEM176AQ96HP8 235 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 Q96MT0 163 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 C17orf75Q9HAS0 396 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 NKIRAS2Q9NYR9 191 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 PEX11AO75192 247 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 TRMUO75648 421 aaKnown RBP15.03■□□□□ -0
SCN3B-201ENST00000299333 ODC1P11926 461 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
SCN3B-201ENST00000299333 DPYSL3Q14195 570 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 COLGALT2Q8IYK4 626 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 MEIOBQ8N635 442 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 COQ6Q9Y2Z9 468 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 SETBP1Q9Y6X0 1596 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 A0A087X1B8 175 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 A0A0U1RQJ8 604 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 DDX3XO00571 662 aaKnown RBP eCLIP15.03■□□□□ -0
SCN3B-201ENST00000299333 WFS1O76024 890 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 HPCAL1P37235 193 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 NAGLUP54802 743 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 BST1Q10588 318 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 MFSD14CQ5VZR4 134 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 AAGABQ6PD74 315 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 ASB2Q96Q27 587 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 CBX4O00257 560 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 NCAM2O15394 837 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 ATF6P18850 670 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 TNFRSF8P28908 595 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 CYP24A1Q07973 514 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 QPCTQ16769 361 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 PLET1Q6UQ28 207 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 RAB43Q86YS6 212 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 S100PBPQ96BU1 408 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 BBS4Q96RK4 519 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 SLCO1B3Q9NPD5 702 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 FBXO6Q9NRD1 293 aaPredicted RBP15.03■□□□□ -0
SCN3B-201ENST00000299333 NPHP4O75161 1426 aaPredicted RBP15.03■□□□□ -0
SCN3B-201ENST00000299333 ABLIM1O14639 778 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 FADS2O95864 444 aaKnown RBP15.03■□□□□ -0
SCN3B-201ENST00000299333 FGRP09769 529 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 CYP2C9P11712 490 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 AMPD1P23109 780 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 S100A2P29034 98 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 CAPGP40121 348 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 NPTX2P47972 431 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 GMFBP60983 142 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 BICRALQ6AI39 1079 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 RHOBTB2Q9BYZ6 727 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 MAPRE3Q9UPY8 281 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 CRYL1Q9Y2S2 319 aa15.03■□□□□ -0
SCN3B-201ENST00000299333 DHRS12A0PJE2 317 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 MYL9P24844 172 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 FMO4P31512 558 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 EFEMP1Q12805 493 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 GLB1LQ6UWU2 654 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 DEPDC4Q8N2C3 294 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 NAT14Q8WUY8 206 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 STARD7Q9NQZ5 370 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 A0A087WZ62 844 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 TRIM3O75382 744 aaPredicted RBP15.02■□□□□ -0
SCN3B-201ENST00000299333 DHFRP00374 187 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 TGM3Q08188 693 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 RABL6Q3YEC7 729 aaPredicted RBP15.02■□□□□ -0
SCN3B-201ENST00000299333 ART5Q96L15 291 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 ALG9Q9H6U8 611 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 MORF4L1Q9UBU8 362 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 RGS17Q9UGC6 210 aaPredicted RBP15.02■□□□□ -0
SCN3B-201ENST00000299333 ZNF112Q9UJU3 913 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 VPS28Q9UK41 221 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 PRKAB1Q9Y478 270 aa15.02■□□□□ -0
SCN3B-201ENST00000299333 CCRL2O00421 344 aa15.02□□□□□ -0.01
SCN3B-201ENST00000299333 RPS6KA4O75676 772 aa15.02□□□□□ -0.01
SCN3B-201ENST00000299333 PGK1P00558 417 aa15.02□□□□□ -0.01
SCN3B-201ENST00000299333 SERPINA6P08185 405 aa15.02□□□□□ -0.01
SCN3B-201ENST00000299333 ENO2P09104 434 aaPredicted RBP15.02□□□□□ -0.01
SCN3B-201ENST00000299333 CCDC166P0CW27 439 aa15.02□□□□□ -0.01
SCN3B-201ENST00000299333 DLG4P78352 724 aa15.02□□□□□ -0.01
SCN3B-201ENST00000299333 PTPN11Q06124 597 aaPredicted RBP15.02□□□□□ -0.01
SCN3B-201ENST00000299333 BOP1Q14137 746 aaKnown RBP15.02□□□□□ -0.01
SCN3B-201ENST00000299333 PFKFB4Q16877 469 aa15.02□□□□□ -0.01
SCN3B-201ENST00000299333 MARC1Q5VT66 337 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms