RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SFMBT1Q9UHJ3 866 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 ACOT9Q9Y305 439 aa11.58□□□□□ -0.56
TRUB1-201ENST00000298746 ADGRA2Q96PE1 1338 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 PRSS51A0A1B0GVH4 220 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 MSCO60682 206 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 H2AFYO75367 372 aaKnown RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 PIGRP01833 764 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 PORP16435 677 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 ZNF26P17031 533 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 ARL1P40616 181 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 SULT1E1P49888 294 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CNTN2Q02246 1040 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 NIPAL4Q0D2K0 466 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 BFSP2Q13515 415 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 GRM3Q14832 879 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 TMEM132DQ14C87 1099 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 OTUD3Q5T2D3 398 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 BORAQ6PGQ7 559 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 SLC41A1Q8IVJ1 513 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 FIBCD1Q8N539 461 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 TMCO5AQ8N6Q1 288 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CCDC185Q8N715 623 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 HDAC11Q96DB2 347 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 ELMO2Q96JJ3 720 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 PIF1Q9H611 641 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 ACAD9Q9H845 621 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 NCKIPSDQ9NZQ3 722 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 VTI1BQ9UEU0 232 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 NEMP2A6NFY4 417 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 SLCO1B7G3V0H7 640 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 K7EPI3 171 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 FBP2O00757 339 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 GNL1P36915 607 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CSE1LP55060 971 aaKnown RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 INPP5AQ14642 412 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 KIZQ2M2Z5 673 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 RPS27LQ71UM5 84 aaKnown RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CHERPQ8IWX8 916 aaKnown RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 IRGQQ8WZA9 623 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 ASB9Q96DX5 294 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CPB2Q96IY4 423 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 FCRL3Q96P31 734 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 QKIQ96PU8 341 aaKnown RBP eCLIP11.57□□□□□ -0.563e-7■■■■□ 24.8
TRUB1-201ENST00000298746 KCTD15Q96SI1 283 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 LPIN3Q9BQK8 851 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 OXSMQ9NWU1 459 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 AKT3Q9Y243 479 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CFAP99D6REC4 459 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 G3V2L1 256 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 NR5A2O00482 541 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 BCL10O95999 233 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 APOA4P06727 396 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CD97P48960 835 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 RELAQ04206 551 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 MXD4Q14582 209 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 VPS72Q15906 364 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 ANO4Q32M45 955 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 FGD3Q5JSP0 725 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 IER5Q5VY09 327 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CAMK1DQ8IU85 385 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 TMEM102Q8N9M5 508 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 MAGEE2Q8TD90 523 aaPredicted RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 TMPRSS4Q9NRS4 437 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 DAPK2Q9UIK4 370 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 SIX4Q9UIU6 781 aa11.57□□□□□ -0.56
TRUB1-201ENST00000298746 CNOT6Q9ULM6 557 aaKnown RBP11.57□□□□□ -0.56
TRUB1-201ENST00000298746 YDJCA8MPS7 323 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 MLNP12872 115 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ARSAP15289 507 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ZNF182P17025 639 aaPredicted RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 VARSP26640 1264 aaKnown RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 RHDQ02161 417 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CTBP1Q13363 440 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CSHL1Q14406 222 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 FAM83EQ2M2I3 478 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 RGS21Q2M5E4 152 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ZBED5Q49AG3 693 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CHSY3Q70JA7 882 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 SPPL2CQ8IUH8 684 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 FSTL5Q8N475 847 aaPredicted RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CNTD1Q8N815 330 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ACVR1CQ8NER5 493 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 TNIP2Q8NFZ5 429 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 OR9I1Q8NGQ6 314 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 NDRG1Q92597 394 aaKnown RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 RTP4Q96DX8 246 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 NRBF2Q96F24 287 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 TCF12Q99081 682 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 YIPF2Q9BWQ6 316 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CCDC90BQ9GZT6 254 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 C2orf40Q9H1Z8 148 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 CDT1Q9H211 546 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 SNX25Q9H3E2 840 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 POMKQ9H5K3 350 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 ZNF277Q9NRM2 450 aaPredicted RBP11.56□□□□□ -0.56
TRUB1-201ENST00000298746 OLAHQ9NV23 265 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 TBCCD1Q9NVR7 557 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 AFG3L2Q9Y4W6 797 aa11.56□□□□□ -0.56
TRUB1-201ENST00000298746 MRPL42Q9Y6G3 142 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms