RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 RAD9AQ99638 391 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 TSSK1BQ9BXA7 367 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 MANSC1Q9H8J5 431 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 CLIC5Q9NZA1 410 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 SPG21Q9NZD8 308 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 SAE1Q9UBE0 346 aaPredicted RBP6.79□□□□□ -1.32
TMC1-201ENST00000297784 DCTN4Q9UJW0 460 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 PPM1HQ9ULR3 514 aa6.79□□□□□ -1.32
TMC1-201ENST00000297784 hCG_1818297A0A087WSY0 165 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 KLF11O14901 512 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 CASQ2O14958 399 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 DENRO43583 198 aaKnown RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 LTFP02788 710 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 DHRS4L1P0CG22 281 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 NCAM1P13591 858 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 CPB1P15086 417 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 VARSP26640 1264 aaKnown RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 ERVFC1P60507 584 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 IRX4P78413 519 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ZBTB16Q05516 673 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PDK3Q15120 406 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PRKD1Q15139 912 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 SPOCD1Q6ZMY3 1216 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 NCCRP1Q6ZVX7 275 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 CENPUQ71F23 418 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 SCN4BQ8IWT1 228 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 HS6ST3Q8IZP7 471 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 C4orf33Q8N1A6 199 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PYROXD2Q8N2H3 581 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 FNDC8Q8TC99 324 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PHOSPHO2Q8TCD6 241 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 FAM149B1Q96BN6 582 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PGAP3Q96FM1 320 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 TMEM169Q96HH4 297 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ABHD8Q96I13 439 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PWWP2AQ96N64 755 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 FAM118BQ9BPY3 351 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 DHRS4Q9BTZ2 278 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 HERC2P3Q9BVR0 1158 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 YIPF2Q9BWQ6 316 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 MAK16Q9BXY0 300 aaKnown RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 KLHL4Q9C0H6 718 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ZBP1Q9H171 429 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ALG13Q9NP73 1137 aaKnown RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 NGRNQ9NPE2 291 aaKnown RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 ZNHIT2Q9UHR6 403 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 MUC3AQ02505 3323 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 A0A0G2JND7 137 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 B2RBV5 119 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 E9PBE3 544 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 H7C4K7 107 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 TEX28O15482 410 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 OR6B1O95007 311 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 DNAJB2P25686 324 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 L1CAMP32004 1257 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PTPN7P35236 360 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 GLUD2P49448 558 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 VPS41P49754 854 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 DPYSL3Q14195 570 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 SFT2D3Q587I9 215 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 TFDP3Q5H9I0 405 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 KLHDC10Q6PID8 442 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 STRADAQ7RTN6 431 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 BBS5Q8N3I7 341 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 FIBCD1Q8N539 461 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ATG4AQ8WYN0 398 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 HSPH1Q92598 858 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 JADE3Q92613 823 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PRR11Q96HE9 360 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 SPATA17Q96L03 361 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 C17orf80Q9BSJ5 609 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 SNRNP25Q9BV90 132 aaKnown RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 OXCT2Q9BYC2 517 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 MRPS26Q9BYN8 205 aaKnown RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.78□□□□□ -1.32
TMC1-201ENST00000297784 GPATCH2LQ9NWQ4 482 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 KCNK4Q9NYG8 393 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 SLC7A8Q9UHI5 535 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 NUDT5Q9UKK9 219 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 SCML2Q9UQR0 700 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 A0A1W2PQH9 124 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ARHGAP10A1A4S6 786 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 LINC01553A4QN01 128 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 M0QYT0 321 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 MDM4O15151 490 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ALOX15BO15296 676 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 TLL1O43897 1013 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 TFAP2AP05549 437 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 KRT7P08729 469 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 PORP16435 677 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 ZNF24P17028 368 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ADRA1DP25100 572 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 ARL4CP56559 192 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 YWHAGP61981 247 aaKnown RBP eCLIP6.78□□□□□ -1.32
TMC1-201ENST00000297784 IFRD2Q12894 506 aaPredicted RBP6.78□□□□□ -1.32
TMC1-201ENST00000297784 SHHQ15465 462 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 MGAT5BQ3V5L5 792 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 SLC44A4Q53GD3 710 aa6.78□□□□□ -1.32
TMC1-201ENST00000297784 SCYL2Q6P3W7 929 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms