RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 IGFBP6P24592 240 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 GRM1Q13255 1194 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 PPP1R3AQ16821 1122 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 GRTP1Q5TC63 336 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 ESRP1Q6NXG1 681 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 UTS2BQ765I0 119 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 ARMCX2Q7L311 632 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 ACTRT2Q8TDY3 377 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 DNAJB3Q8WWF6 145 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 TMIGD2Q96BF3 282 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 QKIQ96PU8 341 aaKnown RBP eCLIP13.51□□□□□ -0.251e-6■■□□□ 12.1
TNFRSF21-201ENST00000296861 SEPHS2Q99611 448 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 GPAMQ9HCL2 828 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 FBRSL1Q9HCM7 1045 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 PIGVQ9NUD9 493 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 DOCK5Q9H7D0 1870 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 TSHRP16473 764 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 STMN1P16949 149 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 RPS12P25398 132 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 ATICP31939 592 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 RPL5P46777 297 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 ARPP19P56211 112 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 CEACAM7Q14002 265 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 OTUD3Q5T2D3 398 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 KLHDC10Q6PID8 442 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 LBX2Q6XYB7 198 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 CHST15Q7LFX5 561 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 IFT43Q96FT9 208 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 TKTL2Q9H0I9 626 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 TMEM165Q9HC07 324 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 UBAP1Q9NZ09 502 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 SLC2A6Q9UGQ3 507 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 CASTOR2A6NHX0 329 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 CNTFP26441 200 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 EPHX2P34913 555 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 SEMA5AQ13591 1074 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 CAPRIN1Q14444 709 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 AAGABQ6PD74 315 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 APOBEC3FQ8IUX4 373 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 PSTKQ8IV42 348 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 PARP8Q8N3A8 854 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 DGCR14Q96DF8 476 aaKnown RBP13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 FAM96AQ9H5X1 160 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 COQ10BQ9H8M1 238 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 ARHGEF38Q9NXL2 777 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 MOCS1Q9NZB8 636 aa13.51□□□□□ -0.25
TNFRSF21-201ENST00000296861 EVPLQ92817 2033 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 DDHD2O94830 711 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TKTP29401 623 aaKnown RBP13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 FASTKQ14296 549 aaKnown RBP13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 NEDD8Q15843 81 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 OFCC1Q8IZS5 231 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 MTMR14Q8NCE2 650 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 RBBP8Q99708 897 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 PCDHB12Q9Y5F1 795 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 FAM95CA0A1B0GW59 222 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 CYP2C9P11712 490 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TPSB2P20231 275 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 NR2C2P49116 596 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 PSME3P61289 254 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 CCNA1P78396 465 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TPSAB1Q15661 275 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TBC1D25Q3MII6 688 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 ARL13BQ3SXY8 428 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 CCDC153Q494R4 210 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 FAM47BQ8NA70 645 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 OR52K2Q8NGK3 314 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 SLC35F5Q8WV83 523 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 ARNTL2Q8WYA1 636 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 HSPBAP1Q96EW2 488 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 SOX17Q9H6I2 414 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 UTP6Q9NYH9 597 aaKnown RBP13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 OR12D3Q9UGF7 316 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 AP4S1Q9Y587 144 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 LRRC37AA6NMS7 1700 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 ARHGAP10A1A4S6 786 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 YJEFN3A6XGL0 299 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TSPAN1O60635 241 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TFPTP0C1Z6 253 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TGFB3P10600 412 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 RGS2P41220 211 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 OAZ1P54368 228 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 CSE1LP55060 971 aaKnown RBP13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 CDKL1Q00532 357 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 GRIK4Q16099 956 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 B3GNT6Q6ZMB0 384 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 ARMCX6Q7L4S7 300 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TNIP3Q96KP6 325 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 HBEGFQ99075 208 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 SFMBT1Q9UHJ3 866 aa13.5□□□□□ -0.25
TNFRSF21-201ENST00000296861 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF21-201ENST00000296861 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF21-201ENST00000296861 UBDO15205 165 aa13.49□□□□□ -0.25
TNFRSF21-201ENST00000296861 TIMM44O43615 452 aa13.49□□□□□ -0.25
TNFRSF21-201ENST00000296861 GABBR2O75899 941 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms