RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TCF4P15884 667 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 IL1R2P27930 398 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 HTR7P34969 479 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 HADHQ16836 314 aaKnown RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 SMTNL2Q2TAL5 461 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 TTC31Q49AM3 519 aaPredicted RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 NIPA2Q8N8Q9 360 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 SLC35G2Q8TBE7 412 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 PIGKQ92643 395 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 GPR174Q9BXC1 333 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 ACE2Q9BYF1 805 aaPredicted RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 FAM107BQ9H098 131 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 NEU3Q9UQ49 428 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 HS3ST2Q9Y278 367 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 GON4LQ3T8J9 2241 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 RALGAPA1Q6GYQ0 2036 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 TMEM110-MUSTN1A8MSY1 372 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 WASH4PA8MWX3 477 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 SMAD6O43541 496 aaKnown RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 ZMPSTE24O75844 475 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 SEC31AO94979 1220 aaKnown RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 RARAP10276 462 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 GOT1P17174 413 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 SLC8A1P32418 973 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 PTGER3P43115 390 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 MAGEA1P43355 309 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 RECQLP46063 649 aaPredicted RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 PSMD8P48556 350 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 DNA2P51530 1060 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 YBEYP58557 167 aaPredicted RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 CST6Q15828 149 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 BEND6Q5SZJ8 279 aaPredicted RBP12.34□□□□□ -0.43
HMGB2-201ENST00000296503 Q6ZVU0 165 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 CYP2U1Q7Z449 544 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 DSG4Q86SJ6 1040 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 CCDC114Q96M63 670 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 PANX2Q96RD6 677 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 OMDQ99983 421 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 OSGEPQ9NPF4 335 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 MED4Q9NPJ6 270 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 SEMA4GQ9NTN9 838 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 FBXL12Q9NXK8 326 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 SCML1Q9UN30 329 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 PCDHGA5Q9Y5G8 931 aa12.34□□□□□ -0.43
HMGB2-201ENST00000296503 WDR87Q6ZQQ6 2873 aa12.33□□□□□ -0.43
HMGB2-201ENST00000296503 MUC22E2RYF6 1773 aaPredicted RBP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 BCLAF3A2AJT9 711 aaKnown RBP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 RASA4BC9J798 803 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 MID1O15344 667 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 RASA4O43374 803 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 BUB1O43683 1085 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 KDELR3O43731 214 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 LRP3O75074 770 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 PROSCO94903 275 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 CYLC1P35663 651 aaPredicted RBP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 MPLP40238 635 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 ARL4AP40617 200 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 ZNF135P52742 658 aaPredicted RBP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 ARF5P84085 180 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 ZNF33AQ06730 810 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 ELAVL3Q14576 367 aaKnown RBP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 MESDQ14696 234 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 SPA17Q15506 151 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 SWT1Q5T5J6 900 aaKnown RBP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 RFX8Q6ZV50 586 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 CYP4V2Q6ZWL3 525 aaPredicted RBP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 RGL4Q8IZJ4 473 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 FAM71BQ8TC56 605 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 FOXJ1Q92949 421 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 BTBD1Q9H0C5 482 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 TNKS2Q9H2K2 1166 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 PABPC3Q9H361 631 aaKnown RBP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 ACBD3Q9H3P7 528 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 VIPAS39Q9H9C1 493 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 PARD6AQ9NPB6 346 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.33□□□□□ -0.44
HMGB2-201ENST00000296503 LCMT1Q9UIC8 334 aa12.33□□□□□ -0.44
HMGB2-201ENST00000296503 USP34Q70CQ2 3546 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 H3BRJ5 948 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 MCF2LO15068 1137 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 RNASEH2AO75792 299 aaKnown RBP12.32□□□□□ -0.44
HMGB2-201ENST00000296503 ADH1BP00325 375 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 ERCC2P18074 760 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 GJC1P36383 396 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 HCAR3P49019 387 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 GEMIN4P57678 1058 aaKnown RBP12.32□□□□□ -0.44
HMGB2-201ENST00000296503 KRT81Q14533 505 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 CSRP2Q16527 193 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 ZFYVE27Q5T4F4 411 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 SYCP2LQ5T4T6 812 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 FAM46CQ5VWP2 391 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 TXNRD3NBQ6F5E7 133 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 TMTC1Q8IUR5 882 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 RHOT2Q8IXI1 618 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 UMODL1-AS1Q8N2C9 162 aa12.32□□□□□ -0.44
HMGB2-201ENST00000296503 HDDC3Q8N4P3 179 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms