RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SLC34A1Q06495 639 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 AFTPHQ6ULP2 937 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 PIK3R5Q8WYR1 880 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 REPS1Q96D71 796 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 EBNA1BP2Q99848 306 aaKnown RBP17.45■□□□□ 0.38
CDCP1-201ENST00000296129 NIFKQ9BYG3 293 aaKnown RBP17.45■□□□□ 0.38
CDCP1-201ENST00000296129 TM6SF2Q9BZW4 377 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 ASB8Q9H765 288 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 ASAH2Q9NR71 780 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 ACTL7BQ9Y614 415 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 IGKV6D-41A0A0C4DH26 115 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 PARNO95453 639 aaKnown RBP17.45■□□□□ 0.38
CDCP1-201ENST00000296129 KRT8P05787 483 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 ARL2P36404 184 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 ZNF438Q7Z4V0 828 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 CNGB3Q9NQW8 809 aa17.45■□□□□ 0.38
CDCP1-201ENST00000296129 GSTM1P09488 218 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PAX3P23760 479 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 SNRPD1P62314 119 aaKnown RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 GALNT3Q14435 633 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PSMD5Q16401 504 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 HGSNATQ68CP4 663 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 ZSCAN18Q8TBC5 510 aaPredicted RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PDZD7Q9H5P4 517 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 GNPTGQ9UJJ9 305 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 MAFBQ9Y5Q3 323 aaPredicted RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 NT5C1B-RDH14C9J2C7 533 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PAPSS1O43252 624 aaPredicted RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PROCP04070 461 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 MRPL28Q13084 256 aaKnown RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 DEFB115Q30KQ5 88 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 CPXM1Q96SM3 734 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PLIN4Q96Q06 1357 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 CST3P01034 146 aaPredicted RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 SLC25A52Q3SY17 297 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 TMEM26Q6ZUK4 368 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 TRAPPC5Q8IUR0 188 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 TMEM139Q8IV31 216 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 OR6Y1Q8NGX8 325 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 NDEL1Q9GZM8 345 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 MTA2O94776 668 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 NUDT17P0C025 328 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 FLT3LGP49771 235 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 CLCN5P51795 746 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PREPLQ4J6C6 727 aaPredicted RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PTGR2Q8N8N7 351 aaPredicted RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 STAG3L4Q8TBR4 150 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 CSGALNACT1Q8TDX6 532 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 TPD52L3Q96J77 140 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 AP4S1Q9Y587 144 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 CILPO75339 1184 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 POM121L1PQ3SYA9 428 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 TMEM199Q8N511 208 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 KCTD4Q8WVF5 259 aa17.44■□□□□ 0.38
CDCP1-201ENST00000296129 PRCCQ92733 491 aaPredicted RBP17.44■□□□□ 0.38
CDCP1-201ENST00000296129 SMIM28A0A1B0GU29 152 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 DYRK3O43781 588 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 ME2P23368 584 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 CREMQ03060 361 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 FRG1Q14331 258 aaKnown RBP17.43■□□□□ 0.38
CDCP1-201ENST00000296129 SPPL2AQ8TCT8 520 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 SUSD6Q92537 303 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 ARHGAP28Q9P2N2 729 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 SNTNA6NMZ2 147 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 H3BMM5 538 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 GSNP06396 782 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 PIK3CGP48736 1102 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 IRX1P78414 480 aaPredicted RBP17.43■□□□□ 0.38
CDCP1-201ENST00000296129 CCDC157Q569K6 752 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 SLC25A23Q9BV35 468 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 FAM228AQ86W67 206 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 TMEM132CQ8N3T6 1108 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 TRPC4APQ8TEL6 797 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 EXOC2Q96KP1 924 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 LIMD1Q9UGP4 676 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 FKTNO75072 461 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 PIRTP0C851 137 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 CTNNB1P35222 781 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 GRIA4P48058 902 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 ADRM1Q16186 407 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 PLEKHM3Q6ZWE6 761 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 KRT78Q8N1N4 520 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 RASGEF1CQ8N431 466 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 NKAPQ8N5F7 415 aaKnown RBP17.43■□□□□ 0.38
CDCP1-201ENST00000296129 ELMO1Q92556 727 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 COG5Q9UP83 839 aa17.43■□□□□ 0.38
CDCP1-201ENST00000296129 TSPAN1O60635 241 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 NEK3P51956 506 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 NAGLUP54802 743 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 PKNOX1P55347 436 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 PFKPQ01813 784 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 OSCP1Q8WVF1 389 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 GLMNQ92990 594 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 TREHO43280 583 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 RPN2P04844 631 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 ITGA2BP08514 1039 aa17.42■□□□□ 0.38
CDCP1-201ENST00000296129 MMP8P22894 467 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms