RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 COPG2Q9UBF2 871 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 ZNF180Q9UJW8 692 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SH3GLB1Q9Y371 365 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 CAPN8A6NHC0 703 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 E7ENQ6 273 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SPAG6O75602 509 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 HSPA4LO95757 839 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SOX11P35716 441 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 COPAP53621 1224 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 DSG1Q02413 1049 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 NOMO2Q5JPE7 1267 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 RASIP1Q5U651 963 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 OTUD1Q5VV17 481 aaPredicted RBP13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 C9orf57Q5W0N0 161 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 TAPT1Q6NXT6 567 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 MAMDC4Q6UXC1 1216 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 DGLUCYQ7Z3D6 616 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 CHPFQ8IZ52 775 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 HASPINQ8TF76 798 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 DNAJB3Q8WWF6 145 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 RTP4Q96DX8 246 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 TCF12Q99081 682 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 MED10Q9BTT4 135 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 SIK2Q9H0K1 926 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 KLF11O14901 512 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 MDM4O15151 490 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 STAMBPO95630 424 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 CPA3P15088 417 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 TSPAN8P19075 237 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 CD9P21926 228 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 BPIFB3P59826 476 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 AP2B1P63010 937 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 NIPAL4Q0D2K0 466 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 NOL9Q5SY16 702 aaKnown RBP13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 KIAA0319Q5VV43 1072 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 RNF135Q8IUD6 432 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 GATA6Q92908 595 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 APBA2Q99767 749 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 CDH22Q9UJ99 828 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
KCNIP3-201ENST00000295225 A0A096LPK6 155 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 NEMP2A6NFY4 417 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 YJEFN3A6XGL0 299 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 MT-CYBP00156 380 aaPredicted RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 USP17L7P0C7H9 530 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 ITGAXP20702 1163 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 NUDT2P50583 147 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 RAP1GDS1P52306 607 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 TNFAIP2Q03169 654 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 TBL3Q12788 808 aaKnown RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 CTBP1Q13363 440 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 SEMA5AQ13591 1074 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 EFHC1Q5JVL4 640 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 C6orf163Q5TEZ5 329 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 GALNT6Q8NCL4 622 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 CERS2Q96G23 380 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 CATSPER2Q96P56 530 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 FTHL17Q9BXU8 183 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 SNX25Q9H3E2 840 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 ANKRD12Q6UB98 2062 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 UNC80Q8N2C7 3258 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 TRIP12Q14669 1992 aaPredicted RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 TTC24A2A3L6 582 aaPredicted RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 KPNA7A9QM74 516 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 CCL22O00626 93 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 ERCC2P18074 760 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 NFKBIAP25963 317 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 NMBRP28336 390 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 GRIA2P42262 883 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 IREB2P48200 963 aaKnown RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 ABCE1P61221 599 aaKnown RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 MSLNQ13421 630 aaPredicted RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 TUBA3CQ13748 450 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 WSCD1Q658N2 575 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 DENND6AQ8IWF6 608 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 ZSCAN18Q8TBC5 510 aaPredicted RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 TRPC4APQ8TEL6 797 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 GDPD5Q8WTR4 605 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 CLK4Q9HAZ1 481 aaKnown RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 C20orf96Q9NUD7 363 aaPredicted RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 ZNF212Q9UDV6 495 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 EVLQ9UI08 416 aaPredicted RBP13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 KIAA1257Q9ULG3 409 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 POMPQ9Y244 141 aa13.49□□□□□ -0.25
KCNIP3-201ENST00000295225 A0A1B0GTW7 788 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 TMEM238LA0A1B0GVL6 79 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 NDC80O14777 642 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 DYNC1LI2O43237 492 aaPredicted RBP13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 BUD23O43709 281 aaKnown RBP13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 MAGEC1O60732 1142 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 GJA5P36382 358 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 PLK1P53350 603 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 MRPS22P82650 360 aaKnown RBP13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 GPR162Q16538 588 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 FBXO47Q5MNV8 452 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 GALNT4Q8N4A0 578 aa13.48□□□□□ -0.25
KCNIP3-201ENST00000295225 TTC16Q8NEE8 873 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms