RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 TRIP10Q15642 601 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 HSDL1Q3SXM5 330 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 COQ5Q5HYK3 327 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 OTUD1Q5VV17 481 aaPredicted RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 FSTL4Q6MZW2 842 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 FAM45BPQ6NSW5 357 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 MAMDC4Q6UXC1 1216 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 EP400NLQ6ZTU2 488 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 TRMT1LQ7Z2T5 733 aaKnown RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 PIWIL4Q7Z3Z4 852 aaKnown RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 CHERPQ8IWX8 916 aaKnown RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 TDHQ8IZJ6 230 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 ZNF567Q8N184 647 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 TOP6BLQ8N6T0 577 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 BEST2Q8NFU1 509 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 PPTC7Q8NI37 304 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 FAM45AQ8TCE6 357 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 DIS3LQ8TF46 1054 aaKnown RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 RNF139Q8WU17 664 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 ZNF560Q96MR9 790 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 LENG8Q96PV6 779 aaPredicted RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 MUC13Q9H3R2 512 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 DHX35Q9H5Z1 703 aaKnown RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 SETD4Q9NVD3 440 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 TBCCD1Q9NVR7 557 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 MARCOQ9UEW3 520 aaPredicted RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 STAP1Q9ULZ2 295 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 LTBP2Q14767 1821 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 A0A087X1B8 175 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 A0A096LPK6 155 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 TCRBV3S1A0A5B6 114 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 XPOTO43592 962 aaKnown RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 ARIH2O95376 493 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 BMP10O95393 424 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 CRTAMO95727 393 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 HSPA4LO95757 839 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 FAM58BPP0C7Q3 252 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 ZCCHC18P0CG32 403 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 KITP10721 976 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 SLC12A1Q13621 1099 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 LRRC23Q53EV4 343 aaPredicted RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 RAB6CQ53S08 254 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 CFAP157Q5JU67 520 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 ZCCHC23Q6ZST2 131 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 KIAA0408Q6ZU52 694 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 HPS6Q86YV9 775 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 PHTF2Q8N3S3 785 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 ZNF781Q8N8C0 355 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 ZUFSPQ96AP4 578 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 HIC2Q96JB3 615 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 TRMOQ9BU70 441 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 SENP6Q9GZR1 1112 aaPredicted RBP6.27□□□□□ -1.41
VCAM1-201ENST00000294728 RAB6CQ9H0N0 254 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 VTA1Q9NP79 307 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 ARMC1Q9NVT9 282 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 EPS15L1Q9UBC2 864 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 VANGL2Q9ULK5 521 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 PSAT1Q9Y617 370 aa6.27□□□□□ -1.41
VCAM1-201ENST00000294728 TRIM24O15164 1050 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 DCXO43602 365 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 MFSD11O43934 449 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 AP1G2O75843 785 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 C2P06681 752 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 ZNF26P17031 533 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 PAX3P23760 479 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 PTPN3P26045 913 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 GRIA1P42261 906 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 RHDQ02161 417 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 TNK2Q07912 1038 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 IFRD2Q12894 506 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 STX5Q13190 355 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 CNGA3Q16281 694 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 KCTD21Q4G0X4 260 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 SLC9B1Q4ZJI4 515 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 LPCAT4Q643R3 524 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 SCYL2Q6P3W7 929 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 NAPRTQ6XQN6 538 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 RFX8Q6ZV50 586 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 FASTKD5Q7L8L6 764 aaKnown RBP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 CARM1Q86X55 608 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 TRIM50Q86XT4 487 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 ERI1Q8IV48 349 aaKnown RBP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 LRRC71Q8N4P6 559 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 CCDC185Q8N715 623 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 ANKFN1Q8N957 763 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 MFSD2AQ8NA29 543 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 TERB1Q8NA31 727 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 ZSCAN18Q8TBC5 510 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 TSPEARQ8WU66 669 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 ITFG2Q969R8 447 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 TNIP3Q96KP6 325 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 SPATA33Q96N06 139 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 FCRL3Q96P31 734 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 CATSPER2Q96P56 530 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 GATA5Q9BWX5 397 aaPredicted RBP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 DUSP16Q9BY84 665 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.26□□□□□ -1.41
VCAM1-201ENST00000294728 SNX25Q9H3E2 840 aa6.26□□□□□ -1.41
VCAM1-201ENST00000294728 UBQLN1Q9UMX0 589 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms