RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SLC27A6Q9Y2P4 619 aa12.58□□□□□ -0.39
SLX4-201ENST00000294008 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.58□□□□□ -0.39
SLX4-201ENST00000294008 RBP1P09455 135 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 HSD17B2P37059 387 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 MAP1SQ66K74 1059 aaPredicted RBP12.58□□□□□ -0.4
SLX4-201ENST00000294008 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 FCRL4Q96PJ5 515 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 MARCH7Q9H992 704 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 MRGBPQ9NV56 204 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 AQP5P55064 265 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 CDH8P55286 799 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 SEMA3AQ14563 771 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 CERCAMQ5T4B2 595 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 LPCAT2Q7L5N7 544 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 CXXC5Q7LFL8 322 aaKnown RBP12.58□□□□□ -0.4
SLX4-201ENST00000294008 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
SLX4-201ENST00000294008 GRIP1Q9Y3R0 1128 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 CLEC3AO75596 197 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 LRATO95237 230 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 CCNOP22674 350 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 SLC30A6Q6NXT4 461 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 COQ8AQ8NI60 647 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 RFT1Q96AA3 541 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 MARK4Q96L34 752 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 QRFPRQ96P65 431 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 MTG1Q9BT17 334 aaPredicted RBP12.58□□□□□ -0.4
SLX4-201ENST00000294008 POMKQ9H5K3 350 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 NDUFAF1Q9Y375 327 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 C15orf38-AP3S2A0A0A6YYH1 394 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 FASP25445 335 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 SERPINA4P29622 427 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 PIK3CGP48736 1102 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 BCAT1P54687 386 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 GPSM1Q86YR5 675 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 DENND1CQ8IV53 801 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 RASGRP3Q8IV61 690 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 CHST13Q8NET6 341 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 OR2L8Q8NGY9 312 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 RP9Q8TA86 221 aaKnown RBP12.58□□□□□ -0.4
SLX4-201ENST00000294008 ITFG1Q8TB96 612 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
SLX4-201ENST00000294008 COQ8BQ96D53 544 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 MCMBPQ9BTE3 642 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 TIPINQ9BVW5 301 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 C3orf18Q9UK00 162 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 ZNF155Q12901 538 aaPredicted RBP12.58□□□□□ -0.4
SLX4-201ENST00000294008 FBXO33Q7Z6M2 555 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 PANX3Q96QZ0 392 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 HTATIP2Q9BUP3 242 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 FNDC11Q9BVV2 318 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 PLGRKTQ9HBL7 147 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 ZFP14Q9HCL3 533 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 WDR62O43379 1518 aa12.58□□□□□ -0.4
SLX4-201ENST00000294008 TEX46H3BTG2 121 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 MDH1P40925 334 aaKnown RBP12.57□□□□□ -0.4
SLX4-201ENST00000294008 SF1Q15637 639 aaKnown RBP12.57□□□□□ -0.4
SLX4-201ENST00000294008 GTF2IRD2BQ6EKJ0 949 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 CXorf57Q6NSI4 855 aaKnown RBP12.57□□□□□ -0.4
SLX4-201ENST00000294008 GTF2IRD2Q86UP8 949 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 SP8Q8IXZ3 490 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 VANGL1Q8TAA9 524 aaPredicted RBP12.57□□□□□ -0.4
SLX4-201ENST00000294008 C7orf25Q9BPX7 421 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 GPRC5CQ9NQ84 441 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 ERVK-18Q9QC07 812 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 CPSF4LA6NMK7 179 aaKnown RBP12.57□□□□□ -0.4
SLX4-201ENST00000294008 OGTO15294 1046 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 OR10H3O60404 316 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 ANPEPP15144 967 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 GRK5P34947 590 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 ECH1Q13011 328 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 MPP3Q13368 585 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 ZDHHC20Q5W0Z9 365 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 IRGCQ6NXR0 463 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 TSHZ1Q6ZSZ6 1077 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 LIX1Q8N485 282 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 C11orf65Q8NCR3 313 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 AP1S3Q96PC3 154 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 CCDC167Q9P0B6 97 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 IRAK3Q9Y616 596 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 FLT1P17948 1338 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 CCDC182A6NF36 153 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 FOXN1O15353 648 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 KCNQ2O43526 872 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 SPAG6O75602 509 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 DBTP11182 482 aaKnown RBP12.57□□□□□ -0.4
SLX4-201ENST00000294008 NT5EP21589 574 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 KLK7P49862 253 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 SPIBQ01892 262 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 TUBB3Q13509 450 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 SLC22A9Q8IVM8 553 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 OR56A4Q8NGH8 313 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 IFT46Q9NQC8 304 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 CLN6Q9NWW5 311 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 C2orf71A6NGG8 1288 aa12.57□□□□□ -0.4
SLX4-201ENST00000294008 CACNB4O00305 520 aaPredicted RBP12.57□□□□□ -0.4
SLX4-201ENST00000294008 TNFAIP8O95379 198 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms