RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 PGM1P36871 562 aa20.3■□□□□ 0.84
CXCL16-201ENST00000293778 KDSRQ06136 332 aa20.3■□□□□ 0.84
CXCL16-201ENST00000293778 MAVSQ7Z434 540 aa20.3■□□□□ 0.84
CXCL16-201ENST00000293778 LRRC49Q8IUZ0 686 aa20.3■□□□□ 0.84
CXCL16-201ENST00000293778 C8orf48Q96LL4 319 aa20.3■□□□□ 0.84
CXCL16-201ENST00000293778 NMRAL1Q9HBL8 299 aa20.3■□□□□ 0.84
CXCL16-201ENST00000293778 TBC1D13Q9NVG8 400 aa20.3■□□□□ 0.84
CXCL16-201ENST00000293778 DNAJC28Q9NX36 388 aa20.3■□□□□ 0.84
CXCL16-201ENST00000293778 H0Y3Z8 333 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 PMPCBO75439 489 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 RPSAP08865 295 aaKnown RBP20.29■□□□□ 0.84
CXCL16-201ENST00000293778 CCNG1P51959 295 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 PIK3R6Q5UE93 754 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 MSANTD2Q6P1R3 559 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 TRAF7Q6Q0C0 670 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 RAPH1Q70E73 1250 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 GIMAP7Q8NHV1 300 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 KCNV2Q8TDN2 545 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 SREK1Q8WXA9 508 aaKnown RBP20.29■□□□□ 0.84
CXCL16-201ENST00000293778 C1orf74Q96LT6 269 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 FSD1LQ9BXM9 530 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 FBXO44Q9H4M3 255 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 DCLRE1BQ9H816 532 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 ENTPD7Q9NQZ7 604 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 DNAJB4Q9UDY4 337 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 TLK1Q9UKI8 766 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 PCDHB12Q9Y5F1 795 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 ALOX15P16050 662 aaPredicted RBP20.29■□□□□ 0.84
CXCL16-201ENST00000293778 GRK4P32298 578 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 IDH3AP50213 366 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 RABGAP1LQ5R372 815 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 POTEHQ6S545 545 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 CCDC117Q8IWD4 279 aaPredicted RBP20.29■□□□□ 0.84
CXCL16-201ENST00000293778 RBM15BQ8NDT2 890 aaKnown RBP20.29■□□□□ 0.84
CXCL16-201ENST00000293778 FBXO27Q8NI29 283 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 SLC39A13Q96H72 371 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 GLT1D1Q96MS3 346 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 FAM193BQ96PV7 902 aaPredicted RBP20.29■□□□□ 0.84
CXCL16-201ENST00000293778 IPO11Q9UI26 975 aaKnown RBP20.29■□□□□ 0.84
CXCL16-201ENST00000293778 ANKRD6Q9Y2G4 727 aa20.29■□□□□ 0.84
CXCL16-201ENST00000293778 NYNRINQ9P2P1 1898 aaKnown RBP20.28■□□□□ 0.84
CXCL16-201ENST00000293778 WASH4PA8MWX3 477 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 VAPBO95292 243 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 SLC2A3P11169 496 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 AOC1P19801 751 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 SAT1P21673 171 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 CSRP3P50461 194 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 TBX4P57082 545 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 FAM189BP81408 668 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 USP10Q14694 798 aaKnown RBP20.28■□□□□ 0.84
CXCL16-201ENST00000293778 UGP2Q16851 508 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 KHDC1Q4VXA5 237 aaKnown RBP20.28■□□□□ 0.84
CXCL16-201ENST00000293778 ARHGAP18Q8N392 663 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 PTCD2Q8WV60 388 aaKnown RBP20.28■□□□□ 0.84
CXCL16-201ENST00000293778 FNIP2Q9P278 1114 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 MID2Q9UJV3 735 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 TCAF1Q9Y4C2 921 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 PCDHB5Q9Y5E4 795 aa20.28■□□□□ 0.84
CXCL16-201ENST00000293778 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 TMEM114B3SHH9 223 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 TADA2AO75478 443 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 HSPA4LO95757 839 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 AHSGP02765 367 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 APOA4P06727 396 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 KPNB1Q14974 876 aaKnown RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 VARS2Q5ST30 1063 aaKnown RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 ESRP1Q6NXG1 681 aaKnown RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 NAPRTQ6XQN6 538 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 CNTN4Q8IWV2 1026 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 RSRC1Q96IZ7 334 aaKnown RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 TSNARE1Q96NA8 513 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 TASP1Q9H6P5 420 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 NOL6Q9H6R4 1146 aaKnown RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 YY1AP1Q9H869 796 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 GMIPQ9P107 970 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 TTC3P53804 2025 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 ZNF195O14628 629 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 MAGEC1O60732 1142 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 TRIM13O60858 407 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 H2AFYO75367 372 aaKnown RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 KLHL2O95198 593 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 GABRB3P28472 473 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 USP46P62068 366 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 MRGPRX2Q96LB1 330 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 MRM3Q9HC36 420 aaKnown RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 CPSF2Q9P2I0 782 aaKnown RBP20.27■□□□□ 0.84
CXCL16-201ENST00000293778 CDY1Q9Y6F8 540 aa20.27■□□□□ 0.84
CXCL16-201ENST00000293778 PHGDHO43175 533 aaKnown RBP20.26■□□□□ 0.83
CXCL16-201ENST00000293778 ARCN1P48444 511 aaKnown RBP20.26■□□□□ 0.83
CXCL16-201ENST00000293778 FNDC1Q4ZHG4 1894 aaPredicted RBP20.26■□□□□ 0.83
CXCL16-201ENST00000293778 RANBP10Q6VN20 620 aa20.26■□□□□ 0.83
CXCL16-201ENST00000293778 KDELC2Q7Z4H8 507 aa20.26■□□□□ 0.83
CXCL16-201ENST00000293778 UMODL1-AS1Q8N2C9 162 aa20.26■□□□□ 0.83
CXCL16-201ENST00000293778 C1QTNF1Q9BXJ1 281 aa20.26■□□□□ 0.83
CXCL16-201ENST00000293778 OXCT2Q9BYC2 517 aaPredicted RBP20.26■□□□□ 0.83
CXCL16-201ENST00000293778 ATXN3LQ9H3M9 355 aa20.26■□□□□ 0.83
CXCL16-201ENST00000293778 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.26■□□□□ 0.83
CXCL16-201ENST00000293778 SYN3O14994 580 aa20.26■□□□□ 0.83
CXCL16-201ENST00000293778 SIN3BO75182 1162 aa20.26■□□□□ 0.83
CXCL16-201ENST00000293778 MYL4P12829 197 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms