RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ANKRD22Q5VYY1 191 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 HEATR6Q6AI08 1181 aaKnown RBP7.72□□□□□ -1.17
TRIM42-201ENST00000286349 KLC3Q6P597 504 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.72□□□□□ -1.17
TRIM42-201ENST00000286349 CEP68Q76N32 757 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 MILR1Q7Z6M3 343 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 PIGWQ7Z7B1 504 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 SLC51BQ86UW2 128 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 SCUBE1Q8IWY4 988 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 STKLD1Q8NE28 680 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 GSTCDQ8NEC7 633 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 CLEC4CQ8WTT0 213 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 TFB1MQ8WVM0 346 aaKnown RBP7.72□□□□□ -1.17
TRIM42-201ENST00000286349 NTAN1Q96AB6 310 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 PGAP3Q96FM1 320 aaPredicted RBP7.72□□□□□ -1.17
TRIM42-201ENST00000286349 ZFP42Q96MM3 310 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 KCTD15Q96SI1 283 aaPredicted RBP7.72□□□□□ -1.17
TRIM42-201ENST00000286349 ADAM2Q99965 735 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 LPIN3Q9BQK8 851 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 ACBD6Q9BR61 282 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 DHRS4Q9BTZ2 278 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 RGS18Q9NS28 235 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 RNF19AQ9NV58 838 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 ETNK2Q9NVF9 386 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 GPATCH2LQ9NWQ4 482 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 CTNNAL1Q9UBT7 734 aa7.72□□□□□ -1.17
TRIM42-201ENST00000286349 NCAM2O15394 837 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 SULT1B1O43704 296 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TSPAN9O75954 239 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TMEM63AO94886 807 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 ZWINTO95229 277 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 GCAP28676 217 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 RFC2P35250 354 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CBX5P45973 191 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 SCTRP47872 440 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 HCAR3P49019 387 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CLCNKBP51801 687 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 AFF1P51825 1210 aaKnown RBP7.71□□□□□ -1.18
TRIM42-201ENST00000286349 GPX6P59796 221 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TBL3Q12788 808 aaKnown RBP7.71□□□□□ -1.18
TRIM42-201ENST00000286349 SPARCL1Q14515 664 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 PDK1Q15118 436 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CA9Q16790 459 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 RAB41Q5JT25 222 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TMEM240Q5SV17 173 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 LGSNQ5TDP6 509 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 RAPH1Q70E73 1250 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 FAM35AQ86V20 835 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 FAM9CQ8IZT9 166 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TMEM199Q8N511 208 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 SEPT8Q92599 483 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 AZIN2Q96A70 460 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 RBM18Q96H35 190 aaKnown RBP7.71□□□□□ -1.18
TRIM42-201ENST00000286349 NUF2Q9BZD4 464 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 VCXQ9H320 206 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TRABDQ9H4I3 376 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 IL23AQ9NPF7 189 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CUEDC1Q9NWM3 386 aaPredicted RBP7.71□□□□□ -1.18
TRIM42-201ENST00000286349 MTMR10Q9NXD2 777 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 PDP2Q9P2J9 529 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TEX264Q9Y6I9 313 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TET1Q8NFU7 2136 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 SCN5AQ14524 2016 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TRAV6A0A075B6T7 132 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 KANSL1LA0AUZ9 987 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 INPPL1O15357 1258 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 HCRTO43612 131 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 KATNA1O75449 491 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 MLNP12872 115 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 NAGAP17050 411 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 GNALP38405 381 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 MAP3K7CLP57077 242 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 DAOAP59103 153 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 LRRC74AQ0VAA2 488 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 SCAPQ12770 1279 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 NR1D2Q14995 579 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 RAB6CQ53S08 254 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 INTS6LQ5JSJ4 861 aaKnown RBP7.71□□□□□ -1.18
TRIM42-201ENST00000286349 NCBP2-AS2Q69YL0 99 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 PLBD1Q6P4A8 553 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 AGMOQ6ZNB7 445 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 PAQR9Q6ZVX9 377 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 TMCO2Q7Z6W1 182 aaPredicted RBP7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CCNJLQ8IV13 435 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 ANKMY2Q8IV38 441 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CCDC116Q8IYX3 515 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 LRRC34Q8IZ02 419 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CYP4X1Q8N118 509 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 THEM5Q8N1Q8 247 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CCDC185Q8N715 623 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 ANKRD42Q8N9B4 389 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 FBF1Q8TES7 1133 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 OLFM3Q96PB7 478 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CEP44Q9C0F1 390 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 RAB6CQ9H0N0 254 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 C10orf88Q9H8K7 445 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CSNK1G1Q9HCP0 422 aa7.71□□□□□ -1.18
TRIM42-201ENST00000286349 CRTAC1Q9NQ79 661 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms