RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 GTSE1Q9NYZ3 720 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 VPS51Q9UID3 782 aa19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 TPX2Q9ULW0 747 aaKnown RBP19.27■□□□□ 0.67
PDLIM3-202ENST00000284770 ARNTLO00327 626 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 DNALI1O14645 258 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 METTL18O95568 372 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 PABPC1P11940 636 aaKnown RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 CD68P34810 354 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 MMP13P45452 471 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 ITGA8P53708 1063 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 DMC1Q14565 340 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 RFTN1Q14699 578 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 LBRQ14739 615 aaKnown RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 PARP6Q2NL67 630 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 PUS10Q3MIT2 529 aaKnown RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 PITRM1Q5JRX3 1037 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 ITPRIPL1Q6GPH6 555 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 PTCRAQ6ISU1 281 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 PCGF5Q86SE9 256 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 NXPE3Q969Y0 559 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 RAB6BQ9NRW1 208 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 DNAJC17Q9NVM6 304 aaKnown RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 IGSF9Q9P2J2 1179 aa19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 UBA2Q9UBT2 640 aaPredicted RBP19.26■□□□□ 0.67
PDLIM3-202ENST00000284770 CXorf51AA0A1B0GTR3 108 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 MAP2K7O14733 419 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 TULP3O75386 442 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 SASH3O75995 380 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 NEBLO76041 1014 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 CISD3P0C7P0 127 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 DGKGP49619 791 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 BASP1P80723 227 aaKnown RBP19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 CASP8Q14790 479 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 FUT11Q495W5 492 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 IZUMO3Q5VZ72 239 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 HDXQ7Z353 690 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 C12orf40Q86WS4 652 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 TAB3Q8N5C8 712 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 BRD9Q9H8M2 597 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 ETNK1Q9HBU6 452 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 LIMD1Q9UGP4 676 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 SLC27A6Q9Y2P4 619 aa19.25■□□□□ 0.67
PDLIM3-202ENST00000284770 NDC80O14777 642 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 TRIM24O15164 1050 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 ATP8B1O43520 1251 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 CD160O95971 181 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 HLA-DQB2P05538 268 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 FDFT1P37268 417 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 TNNT3P45378 269 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 CAV1Q03135 178 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 ITPRIPL2Q3MIP1 535 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 INO80DQ53TQ3 878 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 RNASEH2BQ5TBB1 312 aaKnown RBP19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 RETSATQ6NUM9 610 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 HIBCHQ6NVY1 386 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 AHI1Q8N157 1196 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 MREGQ8N565 214 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 CPT1BQ92523 772 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 GBA3Q9H227 469 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 KCNK12Q9HB15 430 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 RSPH14Q9UHP6 348 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 ANAPC5Q9UJX4 755 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 FAM50BQ9Y247 325 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 ATP8A1Q9Y2Q0 1164 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 FARP1Q9Y4F1 1045 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 ACTL7AQ9Y615 435 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 PSMB4P28070 264 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 GJA4P35212 333 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 GEMIN4P57678 1058 aaKnown RBP19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 AAK1Q2M2I8 961 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 FAXCQ5TGI0 409 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 LINGO4Q6UY18 593 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 ADIPOR2Q86V24 386 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 PPIL6Q8IXY8 311 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 BBS5Q8N3I7 341 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 TTC8Q8TAM2 541 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 TXLNGYQ9BZA5 131 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 GLOD4Q9HC38 313 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 NT5MQ9NPB1 228 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 DEC1Q9P2X7 70 aa19.24■□□□□ 0.67
PDLIM3-202ENST00000284770 NFKB1P19838 968 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 HSPA9P38646 679 aaKnown RBP19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 SLC6A11P48066 632 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 SULT2A1Q06520 285 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 SLC20A2Q08357 652 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 SEMA5AQ13591 1074 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 ZNF235Q14590 738 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 MORF4L2Q15014 288 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 TMC3Q7Z5M5 1100 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 MAFAQ8NHW3 353 aaPredicted RBP19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 PSKH2Q96QS6 385 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 HAUS2Q9NVX0 235 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 MTRF1LQ9UGC7 380 aaKnown RBP19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 SEPT3Q9UH03 358 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 TTLL3Q9Y4R7 772 aa19.23■□□□□ 0.67
PDLIM3-202ENST00000284770 MT-CO1P00395 513 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 MAGEA6P43360 314 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 TFF2Q03403 129 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 KCNJ11Q14654 390 aa19.22■□□□□ 0.67
PDLIM3-202ENST00000284770 CYTH1Q15438 398 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms