RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RAB33AQ14088 237 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 BTG3Q14201 252 aaPredicted RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 SMAD1Q15797 465 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 PARP15Q460N3 678 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 POTEHQ6S545 545 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 STRA8Q7Z7C7 330 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 DDX53Q86TM3 631 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 KCNMB4Q86W47 210 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 CMTR2Q8IYT2 770 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ANKLE1Q8NAG6 615 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ARMC2Q8NEN0 867 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 NSMCE1Q8WV22 266 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 AZIN2Q96A70 460 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 IMP4Q96G21 291 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 PAWRQ96IZ0 340 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF778Q96MU6 729 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 KLHL5Q96PQ7 755 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 AGAP2Q99490 1192 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 RBBP8Q99708 897 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 SP110Q9HB58 689 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 C20orf96Q9NUD7 363 aaPredicted RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 DCDC2Q9UHG0 476 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 DOCK4Q8N1I0 1966 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 TRIM43BA6NCK2 446 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 F5H5T6 163 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 TPP1O14773 563 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 KLF11O14901 512 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 COCHO43405 550 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 CSF2RAP15509 400 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 LAG3P18627 525 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 SLC6A4P31645 630 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ACVRL1P37023 503 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 GJA8P48165 433 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 SLC11A2P49281 568 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 HARS2P49590 506 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ITKQ08881 620 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 PDE1CQ14123 709 aaPredicted RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 GALNTL6Q49A17 601 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 FAM133BQ5BKY9 247 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 PDPK2PQ6A1A2 396 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 KYAT3Q6YP21 454 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ZNF354CQ86Y25 554 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 TRIM42Q8IWZ5 723 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 CFAP52Q8N1V2 620 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 TRIM43Q96BQ3 446 aaPredicted RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 THOC1Q96FV9 657 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 TRMT2BQ96GJ1 504 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 RMDN2Q96LZ7 410 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 NACA2Q9H009 215 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 C11orf49Q9H6J7 331 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 ARNT2Q9HBZ2 717 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 GKN1Q9NS71 199 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 IARS2Q9NSE4 1012 aaKnown RBP9.74□□□□□ -0.85
TRIM55-201ENST00000276573 GGT7Q9UJ14 662 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 YIPF1Q9Y548 306 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 USH1CQ9Y6N9 552 aa9.74□□□□□ -0.85
TRIM55-201ENST00000276573 BIRC5O15392 142 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 EFCAB14O75071 495 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 IL1BP01584 269 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 BPGMP07738 259 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 MMP2P08253 660 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 GSTA1P08263 222 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 TYK2P29597 1187 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 MAGEA12P43365 314 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 SCTRP47872 440 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 LIMK2P53671 638 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 CSE1LP55060 971 aaKnown RBP9.73□□□□□ -0.85
TRIM55-201ENST00000276573 MAXP61244 160 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 WDR5P61964 334 aaKnown RBP9.73□□□□□ -0.85
TRIM55-201ENST00000276573 IHHQ14623 411 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 POU6F1Q14863 301 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 TAF12Q16514 161 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 INSCQ1MX18 579 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 C16orf46Q6P387 395 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 RFWD3Q6PCD5 774 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 KDELC2Q7Z4H8 507 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 NUDCD3Q8IVD9 361 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 DCLK2Q8N568 766 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 FITM2Q8N6M3 262 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 PPHLN1Q8NEY8 458 aaKnown RBP9.73□□□□□ -0.85
TRIM55-201ENST00000276573 ARRDC2Q8TBH0 407 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 ISL2Q96A47 359 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 TADA1Q96BN2 335 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 PLD4Q96BZ4 506 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 PABPC5Q96DU9 382 aaKnown RBP9.73□□□□□ -0.85
TRIM55-201ENST00000276573 MCMBPQ9BTE3 642 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 TSSK1BQ9BXA7 367 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 FSD1LQ9BXM9 530 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 RNF38Q9H0F5 515 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 ATXN3LQ9H3M9 355 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 RXFP1Q9HBX9 757 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 MRM3Q9HC36 420 aaKnown RBP9.73□□□□□ -0.85
TRIM55-201ENST00000276573 ATP13A1Q9HD20 1204 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 VPS45Q9NRW7 570 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 NSMCE4AQ9NXX6 385 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 SIRPGQ9P1W8 387 aa9.73□□□□□ -0.85
TRIM55-201ENST00000276573 MTO1Q9Y2Z2 717 aaKnown RBP9.73□□□□□ -0.85
TRIM55-201ENST00000276573 TCAF1Q9Y4C2 921 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms