RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 CFIP05156 583 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 RALAP11233 206 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 TYRP14679 529 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 GNSP15586 552 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 PIK3CAP42336 1068 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 CASP4P49662 377 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 MAP3K7CLP57077 242 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 COG7P83436 770 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 STK4Q13043 487 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 SEMA3BQ13214 749 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 STARD3Q14849 445 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 NFIL3Q16649 462 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 WDR45BQ5MNZ6 344 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 CLEC20AQ6ZU45 233 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 ZMIZ2Q8NF64 920 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 PLEKHO2Q8TD55 490 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 DCLK3Q9C098 648 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 KCTD10Q9H3F6 313 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 CAPN10Q9HC96 672 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 TMEM74BQ9NUR3 256 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 CLIC5Q9NZA1 410 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 CALCOCO1Q9P1Z2 691 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 FHOD1Q9Y613 1164 aa10.14□□□□□ -0.79
LRTM1-201ENST00000273286 MYH10P35580 1976 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 IGF2RP11717 2491 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 IGHV1OR15-9A0A0B4J2B8 117 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 A0A1W2PQF6 199 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 KLRC4O43908 158 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 NDUFS2O75306 463 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 IRF1P10914 325 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 KRT13P13646 458 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 CCDC130P13994 396 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 ACO1P21399 889 aaKnown RBP10.13□□□□□ -0.79
LRTM1-201ENST00000273286 RPL13P26373 211 aaKnown RBP10.13□□□□□ -0.79
LRTM1-201ENST00000273286 SLC8A3P57103 927 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 CCDC186Q7Z3E2 898 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 PIP4P1Q86T03 277 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 SFTPA1Q8IWL2 248 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 ARHGAP18Q8N392 663 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 KIAA0895Q8NCT3 520 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 DEFB124Q8NES8 71 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 IPO4Q8TEX9 1081 aaKnown RBP10.13□□□□□ -0.79
LRTM1-201ENST00000273286 MZB1Q8WU39 189 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 UCMAQ8WVF2 138 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 CYFIP2Q96F07 1278 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 CCDC34Q96HJ3 373 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 SCNM1Q9BWG6 230 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 ZDHHC5Q9C0B5 715 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 SDCBP2Q9H190 292 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 ZCCHC4Q9H5U6 513 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 FAM49BQ9NUQ9 324 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
LRTM1-201ENST00000273286 SLC27A6Q9Y2P4 619 aa10.13□□□□□ -0.79
LRTM1-201ENST00000273286 CACNA1EQ15878 2313 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 A0A1W2PQ27 194 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 A0A1W2PQ64 194 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 A0A1W2PQC6 194 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 ANTXRLA6NF34 631 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 BEST1O76090 585 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 HLA-DRAP01903 254 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 RARGP13631 454 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 HOXA5P20719 270 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 CD247P20963 164 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 CASP1P29466 404 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 GTF2H1P32780 548 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 VAMP7P51809 220 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 KIF11P52732 1056 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 SIM1P81133 766 aaPredicted RBP10.12□□□□□ -0.79
LRTM1-201ENST00000273286 EIF4HQ15056 248 aaKnown RBP10.12□□□□□ -0.79
LRTM1-201ENST00000273286 C10orf120Q5SQS8 335 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 HLA-DQA1Q5Y7H0 255 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 EGFLAMQ63HQ2 1017 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 JAMLQ86YT9 394 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 HSCBQ8IWL3 235 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 C12orf29Q8N999 325 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 PAGE5Q96GU1 130 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 ZNF419Q96HQ0 510 aaPredicted RBP10.12□□□□□ -0.79
LRTM1-201ENST00000273286 CD248Q9HCU0 757 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 FBXO10Q9UK96 956 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 RCOR1Q9UKL0 485 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 MSRB2Q9Y3D2 182 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 ZNF451Q9Y4E5 1061 aa10.12□□□□□ -0.79
LRTM1-201ENST00000273286 HHLA1C9JL84 531 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 STX10O60499 249 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 TBX18O95935 607 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 PENKP01210 267 aaPredicted RBP10.11□□□□□ -0.79
LRTM1-201ENST00000273286 CYBBP04839 570 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 CMA1P23946 247 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 NR2F2P24468 414 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 ADORA2BP29275 332 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 RPTNQ6XPR3 784 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 TPGS1Q6ZTW0 290 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 MINDY1Q8N5J2 469 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 FRMD1Q8N878 549 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 CADM4Q8NFZ8 388 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 MRGPRX1Q96LB2 322 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 GTPBP2Q9BX10 602 aaKnown RBP10.11□□□□□ -0.79
LRTM1-201ENST00000273286 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
LRTM1-201ENST00000273286 DUSP16Q9BY84 665 aa10.11□□□□□ -0.79
LRTM1-201ENST00000273286 SLC2A11Q9BYW1 496 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms