RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PCID2Q5JVF3 399 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 MARC1Q5VT66 337 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 PKN3Q6P5Z2 889 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 DDX53Q86TM3 631 aaKnown RBP16.89■□□□□ 0.3
CCDC40-201ENST00000269318 ISL2Q96A47 359 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 KLHL5Q96PQ7 755 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 RBBP8Q99708 897 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 PLCD4Q9BRC7 762 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 SPG21Q9NZD8 308 aa16.89■□□□□ 0.3
CCDC40-201ENST00000269318 F5H5T6 163 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 FSBPO95073 299 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 OR1E1P30953 314 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 IL10RBQ08334 325 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 PDE1CQ14123 709 aaPredicted RBP16.89■□□□□ 0.29
CCDC40-201ENST00000269318 RNF43Q68DV7 783 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 KCNMB4Q86W47 210 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 LGI2Q8N0V4 545 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 RMDN2Q96LZ7 410 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 ATP13A1Q9HD20 1204 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 NT5MQ9NPB1 228 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 TXNDC16Q9P2K2 825 aa16.89■□□□□ 0.29
CCDC40-201ENST00000269318 KLF11O14901 512 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 NEBLO76041 1014 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 TOP3BO95985 862 aaKnown RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 MMP2P08253 660 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 ACVRL1P37023 503 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 MAGEA12P43365 314 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 ALDH1A3P47895 512 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 LIG3P49916 1009 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 LIMK2P53671 638 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 WNT3AP56704 352 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 IHHQ14623 411 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 STXBP5Q5T5C0 1151 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 FBXO46Q6PJ61 603 aaPredicted RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 POTEHQ6S545 545 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 STRA8Q7Z7C7 330 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 ARMC2Q8NEN0 867 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 TADA1Q96BN2 335 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 PLD4Q96BZ4 506 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 PABPC5Q96DU9 382 aaKnown RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 FSD1LQ9BXM9 530 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 NACA2Q9H009 215 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 ARNT2Q9HBZ2 717 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 MRM3Q9HC36 420 aaKnown RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 C20orf96Q9NUD7 363 aaPredicted RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 TRPM5Q9NZQ8 1165 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 KLHL14Q9P2G3 628 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 MKI67P46013 3256 aaKnown RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 H3BNC9 293 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 EFCAB14O75071 495 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 KLKB1P03952 638 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 URODP06132 367 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 BGNP21810 368 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 MAGEA9P43362 315 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 HARS2P49590 506 aaKnown RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 MAXP61244 160 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 ACTN3Q08043 901 aaPredicted RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 POU6F1Q14863 301 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 RFWD3Q6PCD5 774 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 CFAP52Q8N1V2 620 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 PGBD5Q8N414 524 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 PTCD2Q8WV60 388 aaKnown RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 AZIN2Q96A70 460 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 RNF38Q9H0F5 515 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 RETREG1Q9H6L5 497 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 ACTR5Q9H9F9 607 aaPredicted RBP16.88■□□□□ 0.29
CCDC40-201ENST00000269318 PDFQ9HBH1 243 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 VPS45Q9NRW7 570 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 SIRPGQ9P1W8 387 aa16.88■□□□□ 0.29
CCDC40-201ENST00000269318 PRAMEF11O60813 436 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 STC2O76061 302 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 IL1BP01584 269 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 SPRP35270 261 aaPredicted RBP16.87■□□□□ 0.29
CCDC40-201ENST00000269318 SLC11A2P49281 568 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 PLD1Q13393 1074 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 PDPK2PQ6A1A2 396 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 KYAT3Q6YP21 454 aaKnown RBP16.87■□□□□ 0.29
CCDC40-201ENST00000269318 C10orf67Q8IYJ2 551 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 ARRDC2Q8TBH0 407 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 AUTS2Q8WXX7 1259 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 PRICKLE1Q96MT3 831 aaPredicted RBP16.87■□□□□ 0.29
CCDC40-201ENST00000269318 HAUS2Q9NVX0 235 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 PCDH10Q9P2E7 1040 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 EMCNQ9ULC0 261 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 TCAF1Q9Y4C2 921 aa16.87■□□□□ 0.29
CCDC40-201ENST00000269318 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 CD86P42081 329 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 CHRNA4P43681 627 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 SCTRP47872 440 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 CSE1LP55060 971 aaKnown RBP16.86■□□□□ 0.29
CCDC40-201ENST00000269318 PDE1BQ01064 536 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 DSC2Q02487 901 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 TWF1Q12792 350 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 GALNTL6Q49A17 601 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 FSTL4Q6MZW2 842 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 TMEM150AQ86TG1 271 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 DENND1CQ8IV53 801 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 TCEAL8Q8IYN2 117 aa16.86■□□□□ 0.29
CCDC40-201ENST00000269318 DCLK2Q8N568 766 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms