RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CFAP47Q6ZTR5 3102 aa9.96□□□□□ -0.82
VPS41-201ENST00000265745 CABIN1Q9Y6J0 2220 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 SPEGQ15772 3267 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 SRRM3A6NNA2 597 aaPredicted RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 C1QTNF3-AMACRE9PGA6 284 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 TAF4O00268 1085 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 SMAD6O43541 496 aaKnown RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 BNIP3LO60238 219 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 ZMPSTE24O75844 475 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 CTSLP07711 333 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 TPM2P07951 284 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 UNGP13051 313 aaPredicted RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 GLDCP23378 1020 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 RRM1P23921 792 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 MAT2AP31153 395 aaKnown RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 CHRNA3P32297 505 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 ADRA1BP35368 520 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 NUDT1P36639 197 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 COPB1P53618 953 aaKnown RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 NXPH1P58417 271 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 TAS2R38P59533 333 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 ATP11AP98196 1134 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 IL9RQ01113 521 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 SLC20A2Q08357 652 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 CCDC14Q49A88 953 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 RAB6CQ53S08 254 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 PIP5KL1Q5T9C9 394 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 NAPEPLDQ6IQ20 393 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 LINGO4Q6UY18 593 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 ZNF783Q6ZMS7 281 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 TMPRSS7Q7RTY8 843 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 PHLDB2Q86SQ0 1253 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 TRIM69Q86WT6 500 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 MFSD2AQ8NA29 543 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 OR7D4Q8NG98 312 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 SLC30A5Q8TAD4 765 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 SAP25Q8TEE9 199 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 RXFP2Q8WXD0 754 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 ZCCHC14Q8WYQ9 949 aaKnown RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 CENPIQ92674 756 aaPredicted RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 PCDHB18PQ96TA0 734 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 SPON2Q9BUD6 331 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 ZYG11BQ9C0D3 744 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 RAB6CQ9H0N0 254 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 ERVMER34-1Q9H9K5 563 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 GDF3Q9NR23 364 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 PPARGC1AQ9UBK2 798 aaKnown RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 LIMA1Q9UHB6 759 aaKnown RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 DAAM1Q9Y4D1 1078 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 MUC22E2RYF6 1773 aaPredicted RBP9.95□□□□□ -0.82
VPS41-201ENST00000265745 CHD6Q8TD26 2715 aa9.95□□□□□ -0.82
VPS41-201ENST00000265745 C2CD4BA6NLJ0 364 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 LGALS16A8MUM7 142 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 RNF103O00237 685 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 CBX4O00257 560 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 ZNF821O75541 412 aaPredicted RBP9.94□□□□□ -0.82
VPS41-201ENST00000265745 FBXO45P0C2W1 286 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 STAT1P42224 750 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 RXRGP48443 463 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 ARRB1P49407 418 aaPredicted RBP9.94□□□□□ -0.82
VPS41-201ENST00000265745 EMP3P54852 163 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 NRG1Q02297 640 aaPredicted RBP9.94□□□□□ -0.82
VPS41-201ENST00000265745 CCDC15Q0P6D6 951 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 SCAPQ12770 1279 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 OVGP1Q12889 678 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 PTP4A2Q12974 167 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 SYCP1Q15431 976 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 C15orf59Q2T9L4 293 aaPredicted RBP9.94□□□□□ -0.82
VPS41-201ENST00000265745 SLC45A4Q5BKX6 768 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 RETSATQ6NUM9 610 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 NEK5Q6P3R8 708 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 SASS6Q6UVJ0 657 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 TRIM72Q6ZMU5 477 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 DPY19L3Q6ZPD9 716 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 IQCHQ86VS3 1027 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 SPATS2Q86XZ4 545 aaKnown RBP9.94□□□□□ -0.82
VPS41-201ENST00000265745 GATAD2AQ86YP4 633 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 CHST14Q8NCH0 376 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 CCDC114Q96M63 670 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 GBP4Q96PP9 640 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 USB1Q9BQ65 265 aaKnown RBP9.94□□□□□ -0.82
VPS41-201ENST00000265745 C11orf70Q9BRQ4 267 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 OSBPL2Q9H1P3 480 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 TNKS2Q9H2K2 1166 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 RETREG1Q9H6L5 497 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 PREBQ9HCU5 417 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 METTL5Q9NRN9 209 aaKnown RBP9.94□□□□□ -0.82
VPS41-201ENST00000265745 ANO10Q9NW15 660 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 OR12D3Q9UGF7 316 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 DMTF1Q9Y222 760 aa9.94□□□□□ -0.82
VPS41-201ENST00000265745 CXorf51AA0A1B0GTR3 108 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 PRAMEF26H0Y7S4 382 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 TK2O00142 265 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 KPNA3O00505 521 aaPredicted RBP9.93□□□□□ -0.82
VPS41-201ENST00000265745 YKT6O15498 198 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 RNGTTO60942 597 aaKnown RBP9.93□□□□□ -0.82
VPS41-201ENST00000265745 GJB6O95452 261 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 PRNPP04156 253 aa9.93□□□□□ -0.82
VPS41-201ENST00000265745 ITGAVP06756 1048 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms