RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 VWA5B1Q5TIE3 1220 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 KHDRBS2Q5VWX1 349 aaKnown RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 R3HDM2Q9Y2K5 976 aaKnown RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 CST1P01037 141 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 UMPSP11172 480 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 CCR3P51677 355 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 ZNF157P51786 506 aaPredicted RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 CRELD2Q6UXH1 353 aaPredicted RBP12.21□□□□□ -0.45
SMG6-201ENST00000263073 FAM13CQ8NE31 585 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 DNAJB3Q8WWF6 145 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 MAML3Q96JK9 1138 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 COPS4Q9BT78 406 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 GANQ9H2C0 597 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 ZFYVE1Q9HBF4 777 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 PLGRKTQ9HBL7 147 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 KIAA1257Q9ULG3 409 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 COMMD3-BMI1R4GMX3 469 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 ASTN1O14525 1302 aa12.21□□□□□ -0.45
SMG6-201ENST00000263073 CCDC182A6NF36 153 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 PSIP1O75475 530 aaKnown RBP12.21□□□□□ -0.46
SMG6-201ENST00000263073 FADS2O95864 444 aaKnown RBP12.21□□□□□ -0.46
SMG6-201ENST00000263073 VAV1P15498 845 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 CDH3P22223 829 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 GSTM5P46439 218 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 SLC6A3Q01959 620 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 ZNF268Q14587 947 aaPredicted RBP12.21□□□□□ -0.46
SMG6-201ENST00000263073 FAM47BQ8NA70 645 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 SYT15Q9BQS2 421 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 SPAG4Q9NPE6 437 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 BAZ2BQ9UIF8 2168 aaKnown RBP12.21□□□□□ -0.46
SMG6-201ENST00000263073 RAMP2O60895 175 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 PDE9AO76083 593 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 TYMPP19971 482 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 CCNA2P20248 432 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 C4BPBP20851 252 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 GRK4P32298 578 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 CD86P42081 329 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 SEMA5AQ13591 1074 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 OR52K2Q8NGK3 314 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 ACTRT2Q8TDY3 377 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 PCYOX1Q9UHG3 505 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 IKZF3Q9UKT9 509 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 SNCAIPQ9Y6H5 919 aa12.21□□□□□ -0.46
SMG6-201ENST00000263073 C9JVG2 144 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 SSNA1O43805 119 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 MSH3P20585 1137 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 NR1H2P55055 460 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 OFCC1Q8IZS5 231 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 ZHX1-C8orf76Q96EF9 292 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 PCDH12Q9NPG4 1184 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 C15orf38-AP3S2A0A0A6YYH1 394 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 TPD52L2O43399 206 aaKnown RBP12.2□□□□□ -0.46
SMG6-201ENST00000263073 KLRC4O43908 158 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 ALDH1A2O94788 518 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 BDNFP23560 247 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 INTS5Q6P9B9 1019 aaKnown RBP12.2□□□□□ -0.46
SMG6-201ENST00000263073 MOXD1Q6UVY6 613 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 ARPINQ7Z6K5 226 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 PROSER1Q86XN7 944 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 LGMNQ99538 433 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 CDH9Q9ULB4 789 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 TCRBV7S2A1N4TA0A589 114 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 SERPINF2P08697 491 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 INSRRP14616 1297 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 IL12AP29459 219 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 TNFSF9P41273 254 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 MTTPP55157 894 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 TBX4P57082 545 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 TTC27Q6P3X3 843 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 RNF44Q7L0R7 432 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 CIB1Q99828 191 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 PDCD2LQ9BRP1 358 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 ATP13A1Q9HD20 1204 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 PMF1-BGLAPU3KQ54 211 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 A0A087X1B8 175 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 RGSL1A5PLK6 1076 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 TRDMT1O14717 391 aaKnown RBP12.2□□□□□ -0.46
SMG6-201ENST00000263073 EPN2O95208 641 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 CPT1AP50416 773 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 AMPD2Q01433 879 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 LGI2Q8N0V4 545 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 PREX1Q8TCU6 1659 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 FAM149AA5PLN7 773 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 RGS14O43566 566 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 ADSSP30520 456 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 OOSP2Q86WS3 158 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 RHBGQ9H310 441 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 CRISPLD1Q9H336 500 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 KCND1Q9NSA2 647 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 EFR3BQ9Y2G0 817 aa12.2□□□□□ -0.46
SMG6-201ENST00000263073 DNM1LO00429 736 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 CYP1A2P05177 515 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 VIL1P09327 827 aaKnown RBP12.19□□□□□ -0.46
SMG6-201ENST00000263073 SHMT1P34896 483 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 MAPK9P45984 424 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 GPR15P49685 360 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 MAXP61244 160 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 RPL38P63173 70 aaKnown RBP12.19□□□□□ -0.46
SMG6-201ENST00000263073 ECM1Q16610 540 aa12.19□□□□□ -0.46
SMG6-201ENST00000263073 FBXO48Q5FWF7 155 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms