RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 ALDH18A1P54886 795 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 OLR1P78380 273 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 EFEMP1Q12805 493 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TTC33Q6PID6 262 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 GLT6D1Q7Z4J2 308 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DCAKDQ8WVC6 231 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 OR8D1Q8WZ84 308 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SUSD6Q92537 303 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 USP6NLQ92738 828 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SLITRK2Q9H156 845 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 MRM3Q9HC36 420 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 OPTCQ9UBM4 332 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TOGARAM1Q9Y4F4 1720 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LGR5O75473 907 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CXCL8P10145 99 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KLRC2P26717 231 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 PTPRNQ16849 979 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 NBPF12Q5TAG4 269 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SLC30A10Q6XR72 485 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 NET1Q7Z628 596 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SLC47A2Q86VL8 602 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CAMK1DQ8IU85 385 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ST13P5Q8NFI4 369 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 EZH1Q92800 747 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ZKSCAN4Q969J2 545 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DUSP9Q99956 384 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 EPB41L4BQ9H329 900 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KCTD10Q9H3F6 313 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CPVLQ9H3G5 476 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ACTR8Q9H981 624 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ATP13A1Q9HD20 1204 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 AURKCQ9UQB9 309 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FIS1Q9Y3D6 152 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 C4BP0C0L5 1744 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 GSAPA4D1B5 854 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 B2RBV5 119 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LATS1O95835 1130 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CCNA2P20248 432 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CCNCP24863 283 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 MAP3K7CLP57077 242 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ACTR3P61158 418 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DDR2Q16832 855 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KIZQ2M2Z5 673 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TTC27Q6P3X3 843 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 PSRC1Q6PGN9 363 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 GLB1L3Q8NCI6 653 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TUBGCP3Q96CW5 907 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 P2RX7Q99572 595 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TTPALQ9BTX7 342 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 NUSAP1Q9BXS6 441 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ADNPQ9H2P0 1102 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 GJB4Q9NTQ9 266 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SETD4Q9NVD3 440 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ARHGAP20Q9P2F6 1191 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 VAV3Q9UKW4 847 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CEP290O15078 2479 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 GLTPD2A6NH11 291 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TBKBP1A7MCY6 615 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FARP2O94887 1054 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ARL2P36404 184 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 SLC1A6P48664 564 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 RPL14P50914 215 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DDR1Q08345 913 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TTC23Q5W5X9 447 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TRIM40Q6P9F5 258 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ILDR2Q71H61 639 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 GPR141Q7Z602 305 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 PEX5LQ8IYB4 626 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LRRC71Q8N4P6 559 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LINC00471Q8N535 108 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 USE1Q9NZ43 259 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 HCN3Q9P1Z3 774 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LEF1Q9UJU2 399 aaPredicted RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 KLHL20Q9Y2M5 609 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 E2F3O00716 465 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FSCN2O14926 492 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 PMPCBO75439 489 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 PRNPP04156 253 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 NR2C1P13056 603 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 HPGDP15428 266 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 LBPP18428 481 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 DPYSL3Q14195 570 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FAM171A1Q5VUB5 890 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 NPAS4Q8IUM7 802 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 HS6ST3Q8IZP7 471 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 MOSPD2Q8NHP6 518 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 BLOC1S5Q8TDH9 187 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 PROX1Q92786 737 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TRIM51Q9BSJ1 452 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 RHOJQ9H4E5 214 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ZSCAN32Q9NX65 697 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 ANGPT4Q9Y264 503 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 A0A087WXM4 84 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 H3BNH8 94 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 FSBPO95073 299 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CALCAP01258 141 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 MMP8P22894 467 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 CLK1P49759 484 aaKnown RBP4.37□□□□□ -1.71
VPS13C-202ENST00000261517 NEPROQ6NW34 567 aa4.37□□□□□ -1.71
VPS13C-202ENST00000261517 TMC7Q7Z402 723 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms