RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 PTGES2Q9H7Z7 377 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 EXD2Q9NVH0 621 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 RBM22Q9NW64 420 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNF38-201ENST00000259605 BLOC1S6Q9UL45 172 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 CA14Q9ULX7 337 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 AP3M1Q9Y2T2 418 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 SPEF1Q9Y4P9 236 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 PCDHGC5Q9Y5F6 944 aa4.1□□□□□ -1.75
RNF38-201ENST00000259605 SAMD9LQ8IVG5 1584 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 A0A087WUV0 522 aaPredicted RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 RNF103-CHMP3A0A140T963 221 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 A0A1B0GTH6 734 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 SAC3D1A6NKF1 404 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 LSM8O95777 96 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 GSTM1P09488 218 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 VAV1P15498 845 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 GJA1P17302 382 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 PAICSP22234 425 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 EEF1DP29692 281 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 CD40LGP29965 261 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 COPAP53621 1224 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 PLTPP55058 493 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 FOXO4P98177 505 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 SPARCL1Q14515 664 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 PGM5Q15124 567 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 ANGPT1Q15389 498 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 CNGA3Q16281 694 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 GLT6D1Q7Z4J2 308 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 CDYL2Q8N8U2 506 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 ICA1LQ8NDH6 482 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 OR2W6PQ8NHA6 318 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 UBA3Q8TBC4 463 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 ING5Q8WYH8 240 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 FAM162AQ96A26 154 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 C19orf60Q96EN9 201 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 RBM18Q96H35 190 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 TMEM176AQ96HP8 235 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 CSPG4P5Q96PW8 444 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 TESK2Q96S53 571 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 INTS9Q9NV88 658 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 TAS2R13Q9NYV9 303 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 ANGPTL2Q9UKU9 493 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 DNMT1P26358 1616 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 E9PBE3 544 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 SLC31A1O15431 190 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 JAK2O60674 1132 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 MATN4O95460 622 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 POP4O95707 220 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 CSTBP04080 98 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 AMPD1P23109 780 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 BDNFP23560 247 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 ACTR1BP42025 376 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 CCNG1P51959 295 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 PTPN5P54829 565 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 PPARDQ03181 441 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 GABPB1Q06547 395 aaPredicted RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 SPIRE1Q08AE8 756 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 CSHL1Q14406 222 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 SF1Q15637 639 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 GRIK5Q16478 980 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 CBWD6Q4V339 395 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 SH3BP5LQ7L8J4 393 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 SPATS2Q86XZ4 545 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 LIX1LQ8IVB5 337 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 SLC44A2Q8IWA5 706 aaPredicted RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 CMTR2Q8IYT2 770 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 FAM46DQ8NEK8 389 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 ZNF555Q8NEP9 628 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 POF1BQ8WVV4 589 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 GTPBP3Q969Y2 492 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 HEPHQ9BQS7 1158 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 SRMSQ9H3Y6 488 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 LRRC40Q9H9A6 602 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 POLG2Q9UHN1 485 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 MAFFQ9ULX9 164 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 VPS4AQ9UN37 437 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 DERAQ9Y315 318 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 KCNE2Q9Y6J6 123 aa4.09□□□□□ -1.75
RNF38-201ENST00000259605 CEP170BQ9Y4F5 1589 aaPredicted RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 RIMS1Q86UR5 1692 aaKnown RBP4.09□□□□□ -1.75
RNF38-201ENST00000259605 KIF13AQ9H1H9 1805 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 C16orf96A6NNT2 1141 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 H0Y3Z8 333 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 O00370 1275 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 AP3D1O14617 1153 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CYTH3O43739 400 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 SIN3BO75182 1162 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 RBMXL2O75526 392 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 FTLP02792 175 aaPredicted RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 WEE2P0C1S8 567 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 PABPC4LP0CB38 370 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 MAPTP10636 758 aaKnown RBP4.09□□□□□ -1.76
RNF38-201ENST00000259605 CLUP10909 449 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 MYL2P10916 166 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 ATP4AP20648 1035 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 ITGA3P26006 1051 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 CDC25AP30304 524 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 TIE1P35590 1138 aa4.09□□□□□ -1.76
RNF38-201ENST00000259605 MATKP42679 507 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms