RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 TRPC3Q13507 836 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 SEPT6Q14141 434 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 TRIP4Q15650 581 aaPredicted RBP14.92□□□□□ -0.02
RABEPK-201ENST00000259460 SNRNP35Q16560 246 aaKnown RBP14.92□□□□□ -0.02
RABEPK-201ENST00000259460 RNF219Q5W0B1 726 aaPredicted RBP14.92□□□□□ -0.02
RABEPK-201ENST00000259460 KLHL10Q6JEL2 608 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 GPT2Q8TD30 523 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 LMLNQ96KR4 655 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 XYLT2Q9H1B5 865 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 KIAA1586Q9HCI6 787 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 PNPLA8Q9NP80 782 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 SLCO3A1Q9UIG8 710 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 SARDHQ9UL12 918 aa14.92□□□□□ -0.02
RABEPK-201ENST00000259460 SHANK1Q9Y566 2161 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 A0A1W2PQM1 296 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 ARHGAP10A1A4S6 786 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 K7EM74 188 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 NKX2-8O15522 239 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 STAU1O95793 577 aaKnown RBP14.91□□□□□ -0.02
RABEPK-201ENST00000259460 PRCPP42785 496 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 TAS2R38P59533 333 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 CDC20Q12834 499 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 EIF2S3LQ2VIR3 472 aaKnown RBP14.91□□□□□ -0.02
RABEPK-201ENST00000259460 ZNF284Q2VY69 593 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 PITRM1Q5JRX3 1037 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 ADGRF1Q5T601 910 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 CEP135Q66GS9 1140 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 RFWD3Q6PCD5 774 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 C12orf56Q8IXR9 622 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 RBFAQ8N0V3 343 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 ZNF557Q8N988 423 aaPredicted RBP14.91□□□□□ -0.02
RABEPK-201ENST00000259460 APOBEC4Q8WW27 367 aaKnown RBP14.91□□□□□ -0.02
RABEPK-201ENST00000259460 SYAP1Q96A49 352 aaPredicted RBP14.91□□□□□ -0.02
RABEPK-201ENST00000259460 TMEM159Q96B96 161 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 RPL10LQ96L21 214 aaKnown RBP14.91□□□□□ -0.02
RABEPK-201ENST00000259460 SPAG5Q96R06 1193 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 GPR27Q9NS67 375 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 KIAA1468Q9P260 1216 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 CTNND2Q9UQB3 1225 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 DAAM1Q9Y4D1 1078 aa14.91□□□□□ -0.02
RABEPK-201ENST00000259460 NAV3Q8IVL0 2385 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 SPTY2D1-AS1A0A0U1RR47 76 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 PSMA7O14818 248 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 LDLRP01130 860 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 NR2F2P24468 414 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 PPP1R2P41236 205 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 STK19P49842 368 aaPredicted RBP14.9□□□□□ -0.02
RABEPK-201ENST00000259460 C1orf61Q13536 156 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 DEFB109BQ30KR1 87 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 TMEM164Q5U3C3 297 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 ESRP1Q6NXG1 681 aaKnown RBP14.9□□□□□ -0.02
RABEPK-201ENST00000259460 KYAT3Q6YP21 454 aaKnown RBP14.9□□□□□ -0.02
RABEPK-201ENST00000259460 MMS22LQ6ZRQ5 1243 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 DCP2Q8IU60 420 aaKnown RBP14.9□□□□□ -0.02
RABEPK-201ENST00000259460 GPBAR1Q8TDU6 330 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 ELMO3Q96BJ8 720 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 TCTN2Q96GX1 697 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 EPAS1Q99814 870 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 ERRFI1Q9UJM3 462 aaPredicted RBP14.9□□□□□ -0.02
RABEPK-201ENST00000259460 STOML2Q9UJZ1 356 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 FRMD4BQ9Y2L6 1034 aa14.9□□□□□ -0.02
RABEPK-201ENST00000259460 RPL13P26373 211 aaKnown RBP14.89□□□□□ -0.03
RABEPK-201ENST00000259460 NDST1P52848 882 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 ADKP55263 362 aaKnown RBP14.89□□□□□ -0.03
RABEPK-201ENST00000259460 ECT2LQ008S8 904 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 CYP24A1Q07973 514 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 ZNF699Q32M78 642 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 COBLL1Q53SF7 1204 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 FAM46CQ5VWP2 391 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 TIPARPQ7Z3E1 657 aaKnown RBP14.89□□□□□ -0.03
RABEPK-201ENST00000259460 HORMAD1Q86X24 394 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 SLC34A3Q8N130 599 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 CARNMT1Q8N4J0 409 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 KYQ8NBH2 561 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 LRRN3Q9H3W5 708 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 SPASTQ9UBP0 616 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 GULP1Q9UBP9 304 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 APOBEC3BQ9UH17 382 aaKnown RBP14.89□□□□□ -0.03
RABEPK-201ENST00000259460 IPO11Q9UI26 975 aaKnown RBP14.89□□□□□ -0.03
RABEPK-201ENST00000259460 GGT7Q9UJ14 662 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 TRAF3IP3Q9Y228 551 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 USP3Q9Y6I4 520 aa14.89□□□□□ -0.03
RABEPK-201ENST00000259460 ABCA2Q9BZC7 2435 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 TRIM49BA6NDI0 452 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 C1QTNF3-AMACRE9PGA6 284 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 HNRNPRO43390 633 aaKnown RBP14.88□□□□□ -0.03
RABEPK-201ENST00000259460 GCATO75600 419 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 LATS1O95835 1130 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 ANXA6P08133 673 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 ITGB7P26010 798 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 OAS2P29728 719 aaKnown RBP14.88□□□□□ -0.03
RABEPK-201ENST00000259460 ATICP31939 592 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 NUMBP49757 651 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 YWHAGP61981 247 aaKnown RBP eCLIP14.88□□□□□ -0.03
RABEPK-201ENST00000259460 MRPL49Q13405 166 aaKnown RBP14.88□□□□□ -0.03
RABEPK-201ENST00000259460 CDH18Q13634 790 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 PDE1CQ14123 709 aaPredicted RBP14.88□□□□□ -0.03
RABEPK-201ENST00000259460 PRRT3Q5FWE3 981 aa14.88□□□□□ -0.03
RABEPK-201ENST00000259460 ZNF667Q5HYK9 610 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms