RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CNGA3Q16281 694 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 TRIM71Q2Q1W2 868 aaKnown RBP14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 FASTKD1Q53R41 847 aaKnown RBP14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 ZNF280DQ6N043 979 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 COLGALT2Q8IYK4 626 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 DCLK2Q8N568 766 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 OR6P1Q8NGX9 317 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 ZSCAN18Q8TBC5 510 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 C20orf27Q9GZN8 174 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 RGS18Q9NS28 235 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 PLLPQ9Y342 182 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 BPTFQ12830 3046 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 ENPP3O14638 875 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 SNUPNO95149 360 aaKnown RBP14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 HAPLN1P10915 354 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 YWHAQP27348 245 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 OR1D2P34982 312 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 VHLP40337 213 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 ITGA9Q13797 1035 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 PDE1CQ14123 709 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 PTPRCAPQ14761 206 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 KCNMB4Q86W47 210 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 PLD6Q8N2A8 252 aaKnown RBP14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 STMN2Q93045 179 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 BTBD10Q9BSF8 475 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 DHRS4Q9BTZ2 278 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 SP110Q9HB58 689 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 TMEM216Q9P0N5 145 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 MARCH2Q9P0N8 246 aa14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 TSR3Q9UJK0 312 aaKnown RBP14.88□□□□□ -0.03
TRAFD1-201ENST00000257604 M0QZQ0 153 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 TM9SF1O15321 606 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 CCDC22O60826 627 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ESRRAP11474 423 aaPredicted RBP14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 VWA5B1Q5TIE3 1220 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ESRP1Q6NXG1 681 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 KBTBD2Q8IY47 623 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 PSMG2Q969U7 264 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ALKBH8Q96BT7 664 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 LRRC40Q9H9A6 602 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 PRDM5Q9NQX1 630 aaPredicted RBP14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ITM2AO43736 263 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 AP2A1O95782 977 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ACADSP16219 412 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 PRKCHP24723 683 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 CD86P42081 329 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 MPP1Q00013 466 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 PPIDQ08752 370 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 RBBP5Q15291 538 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 TCTN1Q2MV58 587 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ANKRD20A4Q4UJ75 823 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 RASIP1Q5U651 963 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 PIK3R6Q5UE93 754 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 FOXB2Q5VYV0 432 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 LHX8Q68G74 356 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ITPRIPL1Q6GPH6 555 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 CFAP61Q8NHU2 1237 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 NDNQ99608 321 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 OMDQ99983 421 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 CSNK1G1Q9HCP0 422 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 GKN1Q9NS71 199 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 TAS2R1Q9NYW7 299 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 hCG_2014768A0A024R1R8 64 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 A0A0U1RQS6 177 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 FAM159BA6NKW6 160 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ARVCFO00192 962 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 HLA-DQB2P05538 268 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 SKIP12755 728 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 SELPP16109 830 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 CCR10P46092 362 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 SLC10A7Q0GE19 358 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 CES4AQ5XG92 561 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 LRRC74BQ6ZQY2 392 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 C16orf59Q7L2K0 433 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ARCQ7LC44 396 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 C10orf107Q8IVU9 208 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 EXT2Q93063 718 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 NTAN1Q96AB6 310 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 CCDC124Q96CT7 223 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 HMCESQ96FZ2 354 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 TEKT5Q96M29 485 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 MAN1C1Q9NR34 630 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 RCOR3Q9P2K3 495 aaPredicted RBP14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 PCDHB8Q9UN66 801 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 ATP11BQ9Y2G3 1177 aa14.87□□□□□ -0.03
TRAFD1-201ENST00000257604 SORBS2O94875 1100 aaKnown RBP14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 FESP07332 822 aa14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 OR1E1P30953 314 aa14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 ALDH7A1P49419 539 aaKnown RBP14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 VEGFBP49765 207 aa14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 STX3Q13277 289 aa14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 USP10Q14694 798 aaKnown RBP14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 FAM219BQ5XKK7 198 aa14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 PM20D1Q6GTS8 502 aa14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 FSTL4Q6MZW2 842 aa14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 FUT10Q6P4F1 479 aa14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 PTAR1Q7Z6K3 402 aaPredicted RBP14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 RYBPQ8N488 228 aaPredicted RBP14.86□□□□□ -0.03
TRAFD1-201ENST00000257604 EBF4Q9BQW3 602 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms