RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 SNAP91O60641 907 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 CNTN5O94779 1100 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 ADCY5O95622 1261 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 LDOC1O95751 146 aaPredicted RBP10.57□□□□□ -0.72
VPS50-201ENST00000251739 MT-CO1P00395 513 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 TBC1D3HP0C7X1 549 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 PNMA6AP0CW24 399 aaPredicted RBP10.57□□□□□ -0.72
VPS50-201ENST00000251739 USP8P40818 1118 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 GABRB2P47870 512 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 CLDN6P56747 220 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 PTK2Q05397 1052 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 BNIP3Q12983 259 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 ZNF177Q13360 481 aaPredicted RBP10.57□□□□□ -0.72
VPS50-201ENST00000251739 SETMARQ53H47 684 aaPredicted RBP10.57□□□□□ -0.72
VPS50-201ENST00000251739 CCDC157Q569K6 752 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 SLC45A4Q5BKX6 768 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 BRMS1LQ5PSV4 323 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 TBC1D3GQ6DHY5 549 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 OR6B2Q6IFH4 312 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 TBC1D3CQ6IPX1 549 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 PRPF39Q86UA1 669 aaKnown RBP10.57□□□□□ -0.72
VPS50-201ENST00000251739 ZDHHC17Q8IUH5 632 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 TBC1D3Q8IZP1 549 aaPredicted RBP10.57□□□□□ -0.72
VPS50-201ENST00000251739 CACTIN-AS1Q8N1I8 211 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 DCAF4L2Q8NA75 395 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 OR2A12Q8NGT7 310 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 NXPE2Q96DL1 559 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 PPP1R9BQ96SB3 815 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 VPS51Q9UID3 782 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 RP1P56715 2156 aa10.57□□□□□ -0.72
VPS50-201ENST00000251739 ASH1LQ9NR48 2969 aaKnown RBP10.57□□□□□ -0.72
VPS50-201ENST00000251739 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 DRGXA6NNA5 263 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 PRAMEF26H0Y7S4 382 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 M0QYT0 321 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 RNF103O00237 685 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 SMAD6O43541 496 aaKnown RBP10.56□□□□□ -0.72
VPS50-201ENST00000251739 RNGTTO60942 597 aaKnown RBP10.56□□□□□ -0.72
VPS50-201ENST00000251739 ZNF821O75541 412 aaPredicted RBP10.56□□□□□ -0.72
VPS50-201ENST00000251739 GIMD1P0DJR0 217 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 MAT2AP31153 395 aaKnown RBP10.56□□□□□ -0.72
VPS50-201ENST00000251739 HNF1BP35680 557 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 NME3Q13232 169 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 ILKQ13418 452 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 RTP5Q14D33 572 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 MAN2A1Q16706 1144 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 MIIPQ5JXC2 388 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 HES3Q5TGS1 186 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 TRNP1Q6NT89 227 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 NEK5Q6P3R8 708 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 SETD3Q86TU7 594 aaPredicted RBP10.56□□□□□ -0.72
VPS50-201ENST00000251739 SLC25A45Q8N413 288 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 TMIEQ8NEW7 156 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 HNRNPLLQ8WVV9 542 aaKnown RBP10.56□□□□□ -0.72
VPS50-201ENST00000251739 RNF34Q969K3 372 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 ARRDC3Q96B67 414 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 C2orf49Q9BVC5 232 aaPredicted RBP10.56□□□□□ -0.72
VPS50-201ENST00000251739 TKTL2Q9H0I9 626 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 GPR27Q9NS67 375 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 DNAJC12Q9UKB3 198 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 CA5BQ9Y2D0 317 aa10.56□□□□□ -0.72
VPS50-201ENST00000251739 LRRK1Q38SD2 2015 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 A0A0D9SEW6 157 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 K7ERQ8 282 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 TRIM38O00635 465 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 TLX3O43711 291 aaPredicted RBP10.55□□□□□ -0.72
VPS50-201ENST00000251739 MAGEC1O60732 1142 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 ZMPSTE24O75844 475 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 RHOCP08134 193 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 CKMT2P17540 419 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 RRM1P23921 792 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 ACP1P24666 158 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 CHRNA3P32297 505 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 FLT3P36888 993 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 SNX16P57768 344 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 ZNF284Q2VY69 593 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 SLC25A52Q3SY17 297 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 POM121L1PQ3SYA9 428 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 ACCSLQ4AC99 568 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 C22orf39Q6P5X5 142 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 HORMAD1Q86X24 394 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 XYLT1Q86Y38 959 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 MLKLQ8NB16 471 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 CHST14Q8NCH0 376 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 VOPP1Q96AW1 172 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 CRELD1Q96HD1 420 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 C1orf74Q96LT6 269 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 TBCBQ99426 244 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 NAA15Q9BXJ9 866 aaKnown RBP10.55□□□□□ -0.72
VPS50-201ENST00000251739 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 SIK2Q9H0K1 926 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 MUC3BQ9H195 1237 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 PLCB1Q9NQ66 1216 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 TMPRSS4Q9NRS4 437 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.55□□□□□ -0.72
VPS50-201ENST00000251739 STAP1Q9ULZ2 295 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 GTF3C3Q9Y5Q9 886 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 SNX10Q9Y5X0 201 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 WASF2Q9Y6W5 498 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 TENM4Q6N022 2769 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms