RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SLC45A1Q9Y2W3 748 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 COL4A4P53420 1690 aaPredicted RBP16.54■□□□□ 0.24
LTBR-201ENST00000228918 PHGDHO43175 533 aaKnown RBP16.54■□□□□ 0.24
LTBR-201ENST00000228918 CABYRO75952 493 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 LRIG2O94898 1065 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 JCHAINP01591 159 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 THRAP10827 490 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 CCR10P46092 362 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 CXCR3P49682 368 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 PRKAA2P54646 552 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 TRIP10Q15642 601 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 LSM12Q3MHD2 195 aaKnown RBP16.54■□□□□ 0.24
LTBR-201ENST00000228918 STON2Q8WXE9 905 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 APBA2Q99767 749 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 TKTL2Q9H0I9 626 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 ACSS2Q9NR19 701 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 OR12D3Q9UGF7 316 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 TLK1Q9UKI8 766 aa16.54■□□□□ 0.24
LTBR-201ENST00000228918 MYLKQ15746 1914 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 MYBPHLA2RUH7 354 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 AP3B1O00203 1094 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 NEMP1O14524 444 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 PIGNO95427 931 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 F9P00740 461 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 SLC35E2BP0CK96 405 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 PIM1P11309 404 aaPredicted RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 DNAJB2P25686 324 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 NUDT2P50583 147 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 MED21Q13503 144 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 PRPSAP1Q14558 356 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 PPM1LQ5SGD2 360 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 TWF2Q6IBS0 349 aaKnown RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 FAM43BQ6ZT52 329 aaPredicted RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 USP50Q70EL3 339 aaPredicted RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 LCA5Q86VQ0 697 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 SNX32Q86XE0 403 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 ZC3H15Q8WU90 426 aaKnown RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 STYXQ8WUJ0 223 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 EDEM1Q92611 657 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 TSNARE1Q96NA8 513 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 ZNF385DQ9H6B1 395 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 STK39Q9UEW8 545 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 GNEQ9Y223 722 aaKnown RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 CCDC78A2IDD5 438 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 RGSL1A5PLK6 1076 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 HHLA1C9JL84 531 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 SLC22A2O15244 555 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 GRID2O43424 1007 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 PEX1O43933 1283 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 EPHA3P29320 983 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 PGGT1BP53609 377 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 CRYBB1P53674 252 aaPredicted RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 PRKAA1Q13131 559 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 LAMB3Q13751 1172 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 USP10Q14694 798 aaKnown RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 ARL13AQ5H913 290 aaPredicted RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 LINC00523Q86TU6 105 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 CNTD1Q8N815 330 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 KCTD4Q8WVF5 259 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 CELF6Q96J87 481 aaKnown RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 MS4A4AQ96JQ5 239 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 TSPYL2Q9H2G4 693 aaPredicted RBP16.53■□□□□ 0.24
LTBR-201ENST00000228918 WDCPQ9H6R7 721 aa16.53■□□□□ 0.24
LTBR-201ENST00000228918 AIM2O14862 343 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 CACNG3O60359 315 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 SAT1P21673 171 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 GABRB3P28472 473 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 GLRBP48167 497 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 LHX1P48742 406 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 PSEN2P49810 448 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 RPL26P61254 145 aaKnown RBP16.52■□□□□ 0.24
LTBR-201ENST00000228918 NSUN2Q08J23 767 aaKnown RBP eCLIP16.52■□□□□ 0.24
LTBR-201ENST00000228918 DLG1Q12959 904 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 TBC1D25Q3MII6 688 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 PM20D1Q6GTS8 502 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 C16orf89Q6UX73 402 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 OTOP3Q7RTS5 596 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 TMC7Q7Z402 723 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 CENPLQ8N0S6 344 aaPredicted RBP16.52■□□□□ 0.24
LTBR-201ENST00000228918 TMEM86AQ8N2M4 240 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 CPSF7Q8N684 471 aaKnown RBP16.52■□□□□ 0.24
LTBR-201ENST00000228918 RP9Q8TA86 221 aaKnown RBP16.52■□□□□ 0.24
LTBR-201ENST00000228918 LENG1Q96BZ8 264 aaPredicted RBP16.52■□□□□ 0.24
LTBR-201ENST00000228918 PPP1R36Q96LQ0 422 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 FAM210AQ96ND0 272 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 TSGA13Q96PP4 275 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 ZDHHC2Q9UIJ5 367 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 PTCH2Q9Y6C5 1203 aa16.52■□□□□ 0.24
LTBR-201ENST00000228918 CCL15-CCL14A0A0B4J2E2 113 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 TARM1B6A8C7 271 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 HAS3O00219 553 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 PSMD3O43242 534 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 PPARGP37231 505 aaPredicted RBP16.52■□□□□ 0.23
LTBR-201ENST00000228918 AVPR1AP37288 418 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 SLC12A1Q13621 1099 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 PPP2R5DQ14738 602 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 CCL15Q16663 113 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 PRAMEF19Q5SWL8 479 aa16.52■□□□□ 0.23
LTBR-201ENST00000228918 OGFRL1Q5TC84 451 aaPredicted RBP16.52■□□□□ 0.23
LTBR-201ENST00000228918 LRRC8EQ6NSJ5 796 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms