RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 ABCC13Q9NSE7 274 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 SLC12A6Q9UHW9 1150 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 PYCARDQ9ULZ3 195 aa5.89□□□□□ -1.47
AFP-201ENST00000226359 NOTCH4Q99466 2003 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 KCNJ18B7U540 433 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 NPC1O15118 1278 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 RPP40O75818 363 aaKnown RBP5.88□□□□□ -1.47
AFP-201ENST00000226359 APOEP02649 317 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 LTFP02788 710 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 TPM1P09493 284 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 SKILP12757 684 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 KRT9P35527 623 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 SLC11A2P49281 568 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 RGS7P49802 495 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 KCNJ12Q14500 433 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 STARD3Q14849 445 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 SYCP1Q15431 976 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 VWA3BQ502W6 1294 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 USP39Q53GS9 565 aaKnown RBP5.88□□□□□ -1.47
AFP-201ENST00000226359 ZC3H12AQ5D1E8 599 aaKnown RBP5.88□□□□□ -1.47
AFP-201ENST00000226359 RAB41Q5JT25 222 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 C10orf76Q5T2E6 689 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 NUGGCQ68CJ6 796 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 ABHD17CQ6PCB6 329 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 TRIM65Q6PJ69 517 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 TPGS1Q6ZTW0 290 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 TOGARAM2Q6ZUX3 1019 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 SYT13Q7L8C5 426 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 CACNA2D4Q7Z3S7 1137 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 MCATQ8IVS2 390 aaKnown RBP5.88□□□□□ -1.47
AFP-201ENST00000226359 ARHGEF19Q8IW93 802 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 UNC45BQ8IWX7 931 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 SCML4Q8N228 414 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 OR2W6PQ8NHA6 318 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 KIAA1524Q8TCG1 905 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 GAB3Q8WWW8 586 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 SERPINB11Q96P15 392 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 TUBGCP2Q9BSJ2 902 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 CRACR2AQ9BSW2 395 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 NMUR1Q9HB89 426 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 MMP17Q9ULZ9 603 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 PCDHA9Q9Y5H5 950 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 MYO10Q9HD67 2058 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 PIEZO1Q92508 2521 aa5.88□□□□□ -1.47
AFP-201ENST00000226359 PRR5-ARHGAP8B1AHC4 643 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 MDM4O15151 490 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 CACNG3O60359 315 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 LRP3O75074 770 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 STC2O76061 302 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 KLF8O95600 359 aaPredicted RBP5.87□□□□□ -1.47
AFP-201ENST00000226359 CRTAMO95727 393 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 TBX18O95935 607 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 RETP07949 1114 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 PF4V1P10720 104 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 TYRP14679 529 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 DESP17661 470 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 SERPINB3P29508 390 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 GBP1P32455 592 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 OPRD1P41143 372 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 DPP6P42658 865 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 SCNN1BP51168 640 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 ZNF132P52740 706 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 DAOAP59103 153 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 ARHGAP8P85298 464 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 RING1Q06587 406 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 MTA1Q13330 715 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 FZD5Q13467 585 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 RAPGEF1Q13905 1077 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 GRM3Q14832 879 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 PCBP2Q15366 365 aaKnown RBP eCLIP5.87□□□□□ -1.471e-323■■■■■ 36.6
AFP-201ENST00000226359 NKG7Q16617 165 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 PRSS53Q2L4Q9 553 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 GRAMD1BQ3KR37 738 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 CDKAL1Q5VV42 579 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 BSPRYQ5W0U4 402 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 PM20D1Q6GTS8 502 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 RHBDF2Q6PJF5 856 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 ANKS1BQ7Z6G8 1248 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 SCD5Q86SK9 330 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 MAML2Q8IZL2 1156 aaPredicted RBP5.87□□□□□ -1.47
AFP-201ENST00000226359 ADGRG2Q8IZP9 1017 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 NAT16Q8N8M0 369 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 TERB1Q8NA31 727 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 C12orf50Q8NA57 414 aaPredicted RBP5.87□□□□□ -1.47
AFP-201ENST00000226359 CCDC112Q8NEF3 446 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 WFIKKN2Q8TEU8 576 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 LOXL4Q96JB6 756 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 MAGEB10Q96LZ2 347 aaPredicted RBP5.87□□□□□ -1.47
AFP-201ENST00000226359 LRGUKQ96M69 825 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 LSM14BQ9BX40 385 aaKnown RBP5.87□□□□□ -1.47
AFP-201ENST00000226359 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.87□□□□□ -1.47
AFP-201ENST00000226359 NDST4Q9H3R1 872 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 ANLNQ9NQW6 1124 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 TMEM51Q9NW97 253 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 LIMA1Q9UHB6 759 aaKnown RBP5.87□□□□□ -1.47
AFP-201ENST00000226359 MIA3Q5JRA6 1907 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 OTOL1A6NHN0 477 aaPredicted RBP5.87□□□□□ -1.47
AFP-201ENST00000226359 SHISA7A6NL88 538 aa5.87□□□□□ -1.47
AFP-201ENST00000226359 TULP3O75386 442 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms